Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 244596 reads mapping to 90915 Unique genomic coordinates Making up 1746 groups Consisting of 457 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 202593 reads mapping to 92280 Unique genomic coordinates Making up 1756 groups Consisting of 466 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 197510 reads mapping to 103439 Unique genomic coordinates Making up 2028 groups Consisting of 552 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 180306 reads mapping to 93516 Unique genomic coordinates Making up 1816 groups Consisting of 462 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 213805 reads mapping to 100883 Unique genomic coordinates Making up 1973 groups Consisting of 550 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 226788 reads mapping to 100921 Unique genomic coordinates Making up 1945 groups Consisting of 493 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 346897 reads mapping to 95204 Unique genomic coordinates Making up 1858 groups Consisting of 474 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 264995 reads mapping to 97738 Unique genomic coordinates Making up 1861 groups Consisting of 507 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 196913 reads mapping to 94307 Unique genomic coordinates Making up 1811 groups Consisting of 448 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 180467 reads mapping to 91555 Unique genomic coordinates Making up 1764 groups Consisting of 485 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 257139 reads mapping to 95528 Unique genomic coordinates Making up 1815 groups Consisting of 501 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 185775 reads mapping to 91969 Unique genomic coordinates Making up 1807 groups Consisting of 463 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 202376 reads mapping to 98794 Unique genomic coordinates Making up 1873 groups Consisting of 496 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 479744 reads mapping to 99829 Unique genomic coordinates Making up 1940 groups Consisting of 537 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 189817 reads mapping to 100143 Unique genomic coordinates Making up 1880 groups Consisting of 522 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 196258 reads mapping to 97754 Unique genomic coordinates Making up 1915 groups Consisting of 488 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 197504 reads mapping to 95976 Unique genomic coordinates Making up 1899 groups Consisting of 487 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 207270 reads mapping to 101676 Unique genomic coordinates Making up 1956 groups Consisting of 532 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 295007 reads mapping to 97528 Unique genomic coordinates Making up 1918 groups Consisting of 515 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 222321 reads mapping to 103583 Unique genomic coordinates Making up 2001 groups Consisting of 521 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 155704 reads mapping to 92662 Unique genomic coordinates Making up 1821 groups Consisting of 506 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 166975 reads mapping to 90997 Unique genomic coordinates Making up 1769 groups Consisting of 457 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 199361 reads mapping to 96835 Unique genomic coordinates Making up 1856 groups Consisting of 534 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 228534 reads mapping to 96559 Unique genomic coordinates Making up 1898 groups Consisting of 483 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 189032 reads mapping to 98994 Unique genomic coordinates Making up 1951 groups Consisting of 525 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 361764 reads mapping to 97209 Unique genomic coordinates Making up 1934 groups Consisting of 510 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 294539 reads mapping to 101624 Unique genomic coordinates Making up 2024 groups Consisting of 527 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 283469 reads mapping to 93468 Unique genomic coordinates Making up 1808 groups Consisting of 463 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 194427 reads mapping to 94055 Unique genomic coordinates Making up 1779 groups Consisting of 466 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 205274 reads mapping to 91501 Unique genomic coordinates Making up 1779 groups Consisting of 452 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 251649 reads mapping to 98871 Unique genomic coordinates Making up 1918 groups Consisting of 512 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 179245 reads mapping to 98946 Unique genomic coordinates Making up 1863 groups Consisting of 496 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 374665 reads mapping to 97857 Unique genomic coordinates Making up 1892 groups Consisting of 505 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 186765 reads mapping to 95894 Unique genomic coordinates Making up 1820 groups Consisting of 454 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 281111 reads mapping to 94074 Unique genomic coordinates Making up 1819 groups Consisting of 506 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 218360 reads mapping to 102139 Unique genomic coordinates Making up 1966 groups Consisting of 548 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 259622 reads mapping to 96092 Unique genomic coordinates Making up 1851 groups Consisting of 488 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 180990 reads mapping to 92416 Unique genomic coordinates Making up 1820 groups Consisting of 480 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 271260 reads mapping to 91496 Unique genomic coordinates Making up 1773 groups Consisting of 467 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 212625 reads mapping to 98387 Unique genomic coordinates Making up 1890 groups Consisting of 544 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 203079 reads mapping to 96383 Unique genomic coordinates Making up 1873 groups Consisting of 509 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 241168 reads mapping to 102013 Unique genomic coordinates Making up 1940 groups Consisting of 516 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 247107 reads mapping to 94754 Unique genomic coordinates Making up 1889 groups Consisting of 469 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 168979 reads mapping to 96472 Unique genomic coordinates Making up 1941 groups Consisting of 508 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 245264 reads mapping to 94681 Unique genomic coordinates Making up 1785 groups Consisting of 458 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 309338 reads mapping to 100025 Unique genomic coordinates Making up 1896 groups Consisting of 488 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 179219 reads mapping to 99999 Unique genomic coordinates Making up 1893 groups Consisting of 529 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 152278 reads mapping to 90922 Unique genomic coordinates Making up 1769 groups Consisting of 446 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 194429 reads mapping to 95552 Unique genomic coordinates Making up 1819 groups Consisting of 488 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 298950 reads mapping to 99680 Unique genomic coordinates Making up 1930 groups Consisting of 509 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 238416 reads mapping to 97706 Unique genomic coordinates Making up 1896 groups Consisting of 496 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 180308 reads mapping to 90869 Unique genomic coordinates Making up 1750 groups Consisting of 472 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 213771 reads mapping to 99393 Unique genomic coordinates Making up 1951 groups Consisting of 508 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 322817 reads mapping to 99025 Unique genomic coordinates Making up 1979 groups Consisting of 537 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 263133 reads mapping to 97976 Unique genomic coordinates Making up 1883 groups Consisting of 484 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 176262 reads mapping to 94167 Unique genomic coordinates Making up 1824 groups Consisting of 478 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 169991 reads mapping to 96268 Unique genomic coordinates Making up 1872 groups Consisting of 479 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 180474 reads mapping to 98861 Unique genomic coordinates Making up 1918 groups Consisting of 515 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 369922 reads mapping to 93675 Unique genomic coordinates Making up 1830 groups Consisting of 455 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 153433 reads mapping to 91554 Unique genomic coordinates Making up 1811 groups Consisting of 467 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 266749 reads mapping to 95226 Unique genomic coordinates Making up 1847 groups Consisting of 473 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 199976 reads mapping to 94856 Unique genomic coordinates Making up 1868 groups Consisting of 494 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 235358 reads mapping to 100265 Unique genomic coordinates Making up 1960 groups Consisting of 532 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 161697 reads mapping to 94256 Unique genomic coordinates Making up 1821 groups Consisting of 454 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 195102 reads mapping to 99726 Unique genomic coordinates Making up 1988 groups Consisting of 532 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 263366 reads mapping to 93935 Unique genomic coordinates Making up 1855 groups Consisting of 471 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 140755 reads mapping to 84930 Unique genomic coordinates Making up 1631 groups Consisting of 412 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 205239 reads mapping to 95073 Unique genomic coordinates Making up 1818 groups Consisting of 507 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 201021 reads mapping to 101891 Unique genomic coordinates Making up 1995 groups Consisting of 511 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 230089 reads mapping to 94324 Unique genomic coordinates Making up 1866 groups Consisting of 465 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 256798 reads mapping to 93373 Unique genomic coordinates Making up 1838 groups Consisting of 460 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 174369 reads mapping to 93671 Unique genomic coordinates Making up 1796 groups Consisting of 461 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 207507 reads mapping to 99477 Unique genomic coordinates Making up 1951 groups Consisting of 497 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 206372 reads mapping to 92154 Unique genomic coordinates Making up 1814 groups Consisting of 473 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 206929 reads mapping to 99927 Unique genomic coordinates Making up 1904 groups Consisting of 486 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 217039 reads mapping to 98439 Unique genomic coordinates Making up 1874 groups Consisting of 542 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 212504 reads mapping to 92264 Unique genomic coordinates Making up 1775 groups Consisting of 473 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 187442 reads mapping to 96120 Unique genomic coordinates Making up 1908 groups Consisting of 518 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 230190 reads mapping to 101190 Unique genomic coordinates Making up 1967 groups Consisting of 504 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 211116 reads mapping to 95675 Unique genomic coordinates Making up 1833 groups Consisting of 487 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 169263 reads mapping to 96131 Unique genomic coordinates Making up 1867 groups Consisting of 508 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 222440 reads mapping to 92231 Unique genomic coordinates Making up 1803 groups Consisting of 485 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 175089 reads mapping to 97652 Unique genomic coordinates Making up 1858 groups Consisting of 489 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 185863 reads mapping to 100887 Unique genomic coordinates Making up 1982 groups Consisting of 522 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 304269 reads mapping to 92438 Unique genomic coordinates Making up 1815 groups Consisting of 488 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 271244 reads mapping to 97992 Unique genomic coordinates Making up 1905 groups Consisting of 490 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 277714 reads mapping to 95790 Unique genomic coordinates Making up 1885 groups Consisting of 503 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 329338 reads mapping to 99422 Unique genomic coordinates Making up 1930 groups Consisting of 506 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 249110 reads mapping to 95883 Unique genomic coordinates Making up 1865 groups Consisting of 507 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 171715 reads mapping to 91319 Unique genomic coordinates Making up 1792 groups Consisting of 463 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 229911 reads mapping to 93004 Unique genomic coordinates Making up 1806 groups Consisting of 441 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 294252 reads mapping to 101746 Unique genomic coordinates Making up 2008 groups Consisting of 527 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 496845 reads mapping to 98225 Unique genomic coordinates Making up 1893 groups Consisting of 550 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 184430 reads mapping to 97491 Unique genomic coordinates Making up 1901 groups Consisting of 523 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 258025 reads mapping to 104488 Unique genomic coordinates Making up 2065 groups Consisting of 553 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 182240 reads mapping to 94201 Unique genomic coordinates Making up 1853 groups Consisting of 514 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 221532 reads mapping to 103193 Unique genomic coordinates Making up 1994 groups Consisting of 502 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 174523 reads mapping to 95985 Unique genomic coordinates Making up 1862 groups Consisting of 528 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 230007 reads mapping to 98742 Unique genomic coordinates Making up 1930 groups Consisting of 514 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 230687 reads mapping to 97055 Unique genomic coordinates Making up 1840 groups Consisting of 509 clusters