Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 114070 reads mapping to 48196 Unique genomic coordinates Making up 833 groups Consisting of 215 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 97111 reads mapping to 48360 Unique genomic coordinates Making up 847 groups Consisting of 210 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 98078 reads mapping to 54844 Unique genomic coordinates Making up 993 groups Consisting of 248 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 89927 reads mapping to 49381 Unique genomic coordinates Making up 865 groups Consisting of 196 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 105495 reads mapping to 53737 Unique genomic coordinates Making up 979 groups Consisting of 281 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 115054 reads mapping to 53721 Unique genomic coordinates Making up 953 groups Consisting of 233 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 179130 reads mapping to 49803 Unique genomic coordinates Making up 914 groups Consisting of 222 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 141564 reads mapping to 51869 Unique genomic coordinates Making up 905 groups Consisting of 226 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 98626 reads mapping to 49991 Unique genomic coordinates Making up 868 groups Consisting of 196 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 90753 reads mapping to 48205 Unique genomic coordinates Making up 831 groups Consisting of 229 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 126189 reads mapping to 50176 Unique genomic coordinates Making up 879 groups Consisting of 222 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 91523 reads mapping to 48168 Unique genomic coordinates Making up 848 groups Consisting of 200 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 101533 reads mapping to 52350 Unique genomic coordinates Making up 890 groups Consisting of 227 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 242546 reads mapping to 53057 Unique genomic coordinates Making up 956 groups Consisting of 248 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 94921 reads mapping to 53056 Unique genomic coordinates Making up 901 groups Consisting of 243 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 96174 reads mapping to 51400 Unique genomic coordinates Making up 908 groups Consisting of 236 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 98992 reads mapping to 50831 Unique genomic coordinates Making up 934 groups Consisting of 216 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 100651 reads mapping to 53768 Unique genomic coordinates Making up 937 groups Consisting of 232 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 148513 reads mapping to 51585 Unique genomic coordinates Making up 922 groups Consisting of 203 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 113045 reads mapping to 55189 Unique genomic coordinates Making up 966 groups Consisting of 240 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 75551 reads mapping to 48538 Unique genomic coordinates Making up 883 groups Consisting of 237 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 81745 reads mapping to 47790 Unique genomic coordinates Making up 855 groups Consisting of 221 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 101423 reads mapping to 51724 Unique genomic coordinates Making up 911 groups Consisting of 243 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 113627 reads mapping to 51042 Unique genomic coordinates Making up 872 groups Consisting of 211 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 90653 reads mapping to 51878 Unique genomic coordinates Making up 940 groups Consisting of 236 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 197938 reads mapping to 51796 Unique genomic coordinates Making up 920 groups Consisting of 237 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 160363 reads mapping to 53545 Unique genomic coordinates Making up 960 groups Consisting of 239 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 144343 reads mapping to 49376 Unique genomic coordinates Making up 851 groups Consisting of 201 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 93916 reads mapping to 49375 Unique genomic coordinates Making up 837 groups Consisting of 211 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 105356 reads mapping to 47577 Unique genomic coordinates Making up 813 groups Consisting of 194 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 118719 reads mapping to 52084 Unique genomic coordinates Making up 941 groups Consisting of 231 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 90783 reads mapping to 52393 Unique genomic coordinates Making up 907 groups Consisting of 222 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 193639 reads mapping to 51243 Unique genomic coordinates Making up 926 groups Consisting of 237 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 96532 reads mapping to 50890 Unique genomic coordinates Making up 857 groups Consisting of 200 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 142583 reads mapping to 50100 Unique genomic coordinates Making up 858 groups Consisting of 217 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 107497 reads mapping to 54173 Unique genomic coordinates Making up 939 groups Consisting of 255 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 131926 reads mapping to 51296 Unique genomic coordinates Making up 901 groups Consisting of 218 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 87749 reads mapping to 48550 Unique genomic coordinates Making up 852 groups Consisting of 219 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 133818 reads mapping to 48263 Unique genomic coordinates Making up 838 groups Consisting of 203 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 101395 reads mapping to 51999 Unique genomic coordinates Making up 950 groups Consisting of 234 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 101874 reads mapping to 50818 Unique genomic coordinates Making up 875 groups Consisting of 218 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 120682 reads mapping to 53490 Unique genomic coordinates Making up 903 groups Consisting of 236 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 121920 reads mapping to 50379 Unique genomic coordinates Making up 909 groups Consisting of 208 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 81298 reads mapping to 50070 Unique genomic coordinates Making up 894 groups Consisting of 209 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 113175 reads mapping to 49715 Unique genomic coordinates Making up 855 groups Consisting of 193 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 156639 reads mapping to 52912 Unique genomic coordinates Making up 946 groups Consisting of 234 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 88378 reads mapping to 51993 Unique genomic coordinates Making up 897 groups Consisting of 216 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 76624 reads mapping to 47490 Unique genomic coordinates Making up 843 groups Consisting of 200 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 99030 reads mapping to 50688 Unique genomic coordinates Making up 876 groups Consisting of 213 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 142219 reads mapping to 52587 Unique genomic coordinates Making up 948 groups Consisting of 252 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 113136 reads mapping to 51459 Unique genomic coordinates Making up 973 groups Consisting of 239 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 90149 reads mapping to 48036 Unique genomic coordinates Making up 840 groups Consisting of 211 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 101006 reads mapping to 52343 Unique genomic coordinates Making up 927 groups Consisting of 227 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 162205 reads mapping to 52321 Unique genomic coordinates Making up 950 groups Consisting of 234 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 136121 reads mapping to 51305 Unique genomic coordinates Making up 843 groups Consisting of 226 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 85439 reads mapping to 49770 Unique genomic coordinates Making up 875 groups Consisting of 218 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 83494 reads mapping to 50377 Unique genomic coordinates Making up 938 groups Consisting of 209 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 89153 reads mapping to 52282 Unique genomic coordinates Making up 933 groups Consisting of 236 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 198011 reads mapping to 49557 Unique genomic coordinates Making up 885 groups Consisting of 213 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 75119 reads mapping to 47787 Unique genomic coordinates Making up 841 groups Consisting of 197 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 130241 reads mapping to 51161 Unique genomic coordinates Making up 885 groups Consisting of 217 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 96588 reads mapping to 49991 Unique genomic coordinates Making up 862 groups Consisting of 213 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 118161 reads mapping to 53546 Unique genomic coordinates Making up 940 groups Consisting of 214 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 80093 reads mapping to 49696 Unique genomic coordinates Making up 905 groups Consisting of 218 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 93762 reads mapping to 52638 Unique genomic coordinates Making up 931 groups Consisting of 222 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 135139 reads mapping to 49246 Unique genomic coordinates Making up 912 groups Consisting of 188 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 69658 reads mapping to 44894 Unique genomic coordinates Making up 762 groups Consisting of 198 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 98739 reads mapping to 50064 Unique genomic coordinates Making up 882 groups Consisting of 224 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 101202 reads mapping to 54123 Unique genomic coordinates Making up 946 groups Consisting of 227 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 110960 reads mapping to 50014 Unique genomic coordinates Making up 867 groups Consisting of 212 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 131761 reads mapping to 49391 Unique genomic coordinates Making up 867 groups Consisting of 193 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 86532 reads mapping to 50048 Unique genomic coordinates Making up 906 groups Consisting of 217 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 107257 reads mapping to 52698 Unique genomic coordinates Making up 947 groups Consisting of 225 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 107530 reads mapping to 48843 Unique genomic coordinates Making up 878 groups Consisting of 227 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 105141 reads mapping to 52984 Unique genomic coordinates Making up 915 groups Consisting of 227 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 113404 reads mapping to 52561 Unique genomic coordinates Making up 909 groups Consisting of 262 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 106623 reads mapping to 48823 Unique genomic coordinates Making up 882 groups Consisting of 207 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 93963 reads mapping to 50575 Unique genomic coordinates Making up 912 groups Consisting of 224 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 112832 reads mapping to 53029 Unique genomic coordinates Making up 921 groups Consisting of 231 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 106450 reads mapping to 50778 Unique genomic coordinates Making up 873 groups Consisting of 235 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 84663 reads mapping to 50236 Unique genomic coordinates Making up 899 groups Consisting of 222 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 109971 reads mapping to 48626 Unique genomic coordinates Making up 876 groups Consisting of 236 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 87007 reads mapping to 51145 Unique genomic coordinates Making up 878 groups Consisting of 210 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 93359 reads mapping to 53018 Unique genomic coordinates Making up 941 groups Consisting of 203 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 147897 reads mapping to 48535 Unique genomic coordinates Making up 859 groups Consisting of 210 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 140898 reads mapping to 51543 Unique genomic coordinates Making up 882 groups Consisting of 198 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 136172 reads mapping to 50228 Unique genomic coordinates Making up 893 groups Consisting of 216 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 154227 reads mapping to 52627 Unique genomic coordinates Making up 941 groups Consisting of 205 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 125438 reads mapping to 50537 Unique genomic coordinates Making up 917 groups Consisting of 225 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 83016 reads mapping to 47727 Unique genomic coordinates Making up 862 groups Consisting of 191 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 116384 reads mapping to 48585 Unique genomic coordinates Making up 811 groups Consisting of 181 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 146476 reads mapping to 53853 Unique genomic coordinates Making up 965 groups Consisting of 236 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 262577 reads mapping to 52124 Unique genomic coordinates Making up 934 groups Consisting of 242 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 93041 reads mapping to 51210 Unique genomic coordinates Making up 906 groups Consisting of 239 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 122355 reads mapping to 55546 Unique genomic coordinates Making up 975 groups Consisting of 237 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 91604 reads mapping to 49290 Unique genomic coordinates Making up 903 groups Consisting of 210 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 107512 reads mapping to 54851 Unique genomic coordinates Making up 968 groups Consisting of 242 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 86426 reads mapping to 50261 Unique genomic coordinates Making up 899 groups Consisting of 228 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 116868 reads mapping to 52817 Unique genomic coordinates Making up 912 groups Consisting of 247 clusters Running PARalyzer v1.1 Parsing bowtie file(s)...Done Creating Read Groups & Clusters...Done Sorting Groups...Done Generating Output...Done! I identified a total of 117833 reads mapping to 51546 Unique genomic coordinates Making up 853 groups Consisting of 228 clusters