Running PARalyzer v1.1
Parsing bowtie file(s)...nr 500000 chr ENSMUST00000164660 l18  e 0
nr 1000000 chr ENSMUST00000173060 l18  e 0
nr 1500000 chr ENSMUST00000150490 l18  e 0
nr 2000000 chr ENSMUST00000021390 l18  e 0
nr 2500000 chr ENSMUST00000089610 l18  e 0
nr 3000000 chr ENSMUST00000053770 l18  e 0
nr 3500000 chr ENSMUST00000037280 l18  e 0
nr 4000000 chr ENSMUST00000106770 l18  e 0
nr 4500000 chr ENSMUST00000162950 l18  e 0
nr 5000000 chr ENSMUST00000085470 l18  e 0
nr 5500000 chr ENSMUST00000069000 l18  e 0
Done
Creating Read Groups & Clusters...Running PARalyzer v1.1
Parsing bowtie file(s)...nr 500000 chr ENSMUST00000009791 l18  e 1
nr 1000000 chr ENSMUST00000002121 l18  e 1
Running PARalyzer v1.1
Parsing bowtie file(s)...nr 500000 chr ENSMUST00000020312 l18  e 2
Running PARalyzer v1.1
Parsing bowtie file(s)...Running PARalyzer v1.1
Parsing bowtie file(s)...Running PARalyzer v1.1
Parsing bowtie file(s)...Running PARalyzer v1.1
Parsing bowtie file(s)...Running PARalyzer v1.1
Parsing bowtie file(s)...Running PARalyzer v1.1
Parsing bowtie file(s)...Running PARalyzer v1.1
Parsing bowtie file(s)...