chr1	37487208	37487308	8	1	+	chr1	37487016	37495969	Unc50|NM_026123	0	+
chr1	40282133	40282163	5	1	+	chr1	40281924	40373022	Il1r1|NM_008362	0	+
chr1	44745990	44746077	15	2	+	chr1	44608515	44853681	Gulp1|NM_028450	0	+
chr1	75543962	75543993	7	2	+	chr1	75542840	75556006	Slc4a3|NM_009208	0	+
chr1	164500977	164501012	38	2	+	chr1	164500958	164529209	Vamp4|NM_016796	0	+
chr1	192922320	192922363	5	1	+	chr1	192922292	192932822	Batf3|NM_030060	0	+
chr1	4485369	4485400	60	3	-	chr1	4481008	4486494	Sox17|NM_011441	0	-
chr1	37542740	37542766	16	2	-	chr1	37542695	37545450	4930594C11Rik|NR_024017	0	-
chr1	37542740	37542766	16	2	-	chr1	37496184	37593104	Mgat4a|NM_173870	0	-
chr1	37545009	37545070	8	2	-	chr1	37542695	37545450	4930594C11Rik|NR_024017	0	-
chr1	37545009	37545070	8	2	-	chr1	37496184	37593104	Mgat4a|NM_173870	0	-
chr1	43862508	43862535	41	3	-	chr1	43807075	43884553	Uxs1|NM_026430	0	-
chr1	45982221	45982242	5	3	-	chr1	45964914	45982439	Slc40a1|NM_016917	0	-
chr1	46083365	46083388	13	2	-	chr1	46077259	46087282	Gm4776|NR_037690	0	-
chr1	46083365	46083388	13	2	-	chr1	46077259	46087282	Gm4776|NR_037691	0	-
chr1	51534684	51534731	18	1	-	chr1	51526331	51535243	Obfc2a|NM_028696	0	-
chr1	58476673	58476704	79	27	-	chr1	58468831	58480932	Clk1|NR_027853	0	-
chr1	58476673	58476704	79	27	-	chr1	58468831	58480932	Clk1|NR_027854	0	-
chr1	58476673	58476704	79	27	-	chr1	58468831	58480932	Clk1|NM_001042634	0	-
chr1	58477650	58477681	10	1	-	chr1	58468831	58480932	Clk1|NR_027853	0	-
chr1	58477650	58477681	10	1	-	chr1	58468831	58480932	Clk1|NR_027854	0	-
chr1	58477650	58477681	10	1	-	chr1	58468831	58480932	Clk1|NM_001042634	0	-
chr1	60099672	60099729	6	2	-	chr1	60045911	60099931	Ica1l|NM_027407	0	-
chr1	60541176	60541209	5	1	-	chr1	60540028	60623609	Raph1|NM_001045513	0	-
chr1	60542543	60542601	18	1	-	chr1	60540028	60623609	Raph1|NM_001045513	0	-
chr1	88247745	88247769	205	20	-	chr1	88247744	88247860	Snora75|NR_028478	0	-
chr1	88247745	88247769	205	20	-	chr1	88241293	88256030	Ncl|NM_010880	0	-
chr1	89406881	89406934	5	1	-	chr1	89373403	89470445	Ngef|NM_001111314	0	-
chr1	89406881	89406934	5	1	-	chr1	89373403	89406937	Ngef|NM_019867	0	-
chr1	89406881	89406934	5	1	-	chr1	89373403	89470445	Ngef|NM_001111314	0	-
chr1	89406881	89406934	5	1	-	chr1	89373403	89406937	Ngef|NM_019867	0	-
chr1	107251692	107251741	7	2	-	chr1	107173493	107253287	Rnf152|NM_178779	0	-
chr1	107251692	107251741	7	2	-	chr1	107173493	107253287	Rnf152|NM_001160368	0	-
chr1	133934286	133934338	6	1	-	chr1	133933359	133964639	Mfsd4|NM_001114662	0	-
chr1	133934286	133934338	6	1	-	chr1	133923197	133964639	Mfsd4|NM_172510	0	-
chr1	157881826	157881862	16	2	-	chr1	157851728	157883610	Tor1aip1|NM_001160018	0	-
chr1	157881826	157881862	16	2	-	chr1	157851728	157881947	Tor1aip1|NM_001160019	0	-
chr1	157881826	157881862	16	2	-	chr1	157851728	157883610	Tor1aip1|NM_144791	0	-
chr1	167531890	167531914	5	1	-	chr1	167522311	167564672	Mpzl1|NM_001001880	0	-
chr1	167531890	167531914	5	1	-	chr1	167522311	167564672	Mpzl1|NM_001083897	0	-
chr1	168611248	168611270	10	1	-	chr1	168592185	168611976	Fmo9|NM_172844	0	-
chr1	178143949	178143977	11	1	-	chr1	177892436	178144073	Pld5|NM_001195816	0	-
chr1	178143949	178143977	11	1	-	chr1	177892436	178205443	Pld5|NM_176916	0	-
chr1	180258774	180258802	16	2	-	chr1	180258430	180267915	Hnrnpu|NM_016805	0	-
chr1	180258876	180258930	14	3	-	chr1	180258430	180267915	Hnrnpu|NM_016805	0	-
chr1	181459431	181459501	22	2	-	chr1	181458186	181476398	Tfb2m|NM_008249	0	-
chr1	188959171	188959220	8	1	-	chr1	188959171	189039325	Spata17|NM_029067	0	-
chr1	188959171	188959220	8	1	-	chr1	188872285	189039325	Spata17|NM_028848	0	-
chr1	188959358	188959387	11	3	-	chr1	188959171	189039325	Spata17|NM_029067	0	-
chr1	188959358	188959387	11	3	-	chr1	188872285	189039325	Spata17|NM_028848	0	-
chr1	193720495	193720519	6	1	-	chr1	193717950	193731406	1700034H15Rik|NR_030669	0	-
chr1	193722360	193722393	11	2	-	chr1	193717950	193731406	1700034H15Rik|NR_030669	0	-
chr10	4428292	4428354	7	1	+	chr10	4424140	4520877	Rgs17|NM_019958	0	+
chr10	4428292	4428354	7	1	+	chr10	4424140	4520877	Rgs17|NM_001161822	0	+
chr10	5914265	5914287	16	1	+	chr10	5914188	5943372	Rmnd1|NM_025343	0	+
chr10	18127920	18127971	11	2	+	chr10	18127480	18253697	Nhsl1|NM_173390	0	+
chr10	21712105	21712156	13	1	+	chr10	21712028	21719708	Sgk1|NM_001161849	0	+
chr10	21712105	21712156	13	1	+	chr10	21698477	21719708	Sgk1|NM_001161847	0	+
chr10	21712105	21712156	13	1	+	chr10	21705909	21719708	Sgk1|NM_001161848	0	+
chr10	21712105	21712156	13	1	+	chr10	21601989	21719708	Sgk1|NM_001161845	0	+
chr10	21712105	21712156	13	1	+	chr10	21712028	21719708	Sgk1|NM_001161849	0	+
chr10	21712105	21712156	13	1	+	chr10	21698477	21719708	Sgk1|NM_001161847	0	+
chr10	21712105	21712156	13	1	+	chr10	21705909	21719708	Sgk1|NM_001161848	0	+
chr10	21712105	21712156	13	1	+	chr10	21601989	21719708	Sgk1|NM_001161845	0	+
chr10	67001017	67001047	10	1	+	chr10	67000616	67004936	Egr2|NM_010118	0	+
chr10	80253504	80253526	7	1	+	chr10	80217950	80257092	Dot1l|NM_199322	0	+
chr10	82323100	82323127	15	2	+	chr10	82321950	82360469	Txnrd1|NM_015762	0	+
chr10	82323100	82323127	15	2	+	chr10	82323085	82360469	Txnrd1|NM_001042514	0	+
chr10	82323100	82323127	15	2	+	chr10	82321950	82360469	Txnrd1|NM_001042513	0	+
chr10	82323100	82323127	15	2	+	chr10	82296695	82360469	Txnrd1|NM_001042523	0	+
chr10	85487163	85487190	15	7	+	chr10	85484673	85511073	Fbxo7|NM_153195	0	+
chr10	3557874	3557920	56	3	-	chr10	3308331	3557940	Oprm1|NM_001039652	0	-
chr10	20338992	20339015	30	3	-	chr10	20117809	20444874	Pde7b|NM_013875	0	-
chr10	31134028	31134049	12	7	-	chr10	31133531	31134241	Gm3258|NM_011509	0	-
chr10	31134028	31134049	12	7	-	chr10	31052185	31165727	Tpd52l1|NM_009413	0	-
chr10	33649759	33649794	13	3	-	chr10	33646741	33671018	Zufsp|NM_028287	0	-
chr10	53654786	53654820	11	8	-	chr10	53625838	53795602	Man1a|NM_008548	0	-
chr10	59775122	59775147	13	5	-	chr10	59766021	60159238	Cdh23|NM_023370	0	-
chr10	74972381	74972424	7	2	-	chr10	74969558	74980067	1110038D17Rik|NM_175133	0	-
chr10	79861942	79862031	6	1	-	chr10	79855285	79862224	Mbd3|NM_013595	0	-
chr10	86329495	86329522	77	23	-	chr10	86303954	86470687	Stab2|NM_138673	0	-
chr11	21036176	21036205	9	1	+	chr11	20991326	21050330	Peli1|NM_023324	0	+
chr11	51087115	51087141	91	7	+	chr11	51076672	51095266	Clk4|NM_007714	0	+
chr11	75345225	75345261	6	1	+	chr11	75345195	75391074	Slc43a2|NM_001199284	0	+
chr11	75345225	75345261	6	1	+	chr11	75345195	75391074	Slc43a2|NM_173388	0	+
chr11	95703986	95704009	13	2	+	chr11	95703608	95707045	Gngt2|NM_023121	0	+
chr11	95703986	95704009	13	2	+	chr11	95703981	95707045	Gngt2|NM_001038664	0	+
chr11	115676099	115676139	8	2	+	chr11	115676052	115684416	Tsen54|NM_029557	0	+
chr11	117127759	117127794	9	1	+	chr11	117127559	117223639	Sept9|NM_001113487	0	+
chr11	117127759	117127794	9	1	+	chr11	117060974	117223639	Sept9|NM_001113486	0	+
chr11	120459923	120459997	8	1	+	chr11	120459734	120469512	Anapc11|NM_025389	0	+
chr11	120459923	120459997	8	1	+	chr11	120459845	120469512	Anapc11|NM_001038230	0	+
chr11	3064667	3064719	119	32	-	chr11	3031852	3093466	Sfi1|NM_030207	0	-
chr11	3544513	3544540	12	1	-	chr11	3539796	3548811	Tug1|NR_002321	0	-
chr11	3544513	3544540	12	1	-	chr11	3543270	3547536	Tug1|NR_002322	0	-
chr11	3544706	3544787	6	1	-	chr11	3539796	3548811	Tug1|NR_002321	0	-
chr11	3544706	3544787	6	1	-	chr11	3543270	3547536	Tug1|NR_002322	0	-
chr11	20608726	20608750	13	12	-	chr11	20585087	20641487	Aftph|NM_181411	0	-
chr11	25886799	25886833	135	18	-	chr11	25516845	26110576	5730522E02Rik|NR_027973	0	-
chr11	30097824	30097866	5	1	-	chr11	29999394	30119772	Spnb2|NM_175836	0	-
chr11	30097824	30097866	5	1	-	chr11	30006842	30098257	Spnb2|NM_009260	0	-
chr11	33374938	33374968	8	1	-	chr11	33111793	33413746	Ranbp17|NM_023146	0	-
chr11	33387730	33387752	5	1	-	chr11	33111793	33413746	Ranbp17|NM_023146	0	-
chr11	53488454	53488513	6	1	-	chr11	53463020	53520821	Rad50|NM_009012	0	-
chr11	54666784	54666809	39	22	-	chr11	54652790	54674093	Lyrm7|NM_029327	0	-
chr11	69392705	69392755	6	1	-	chr11	69375255	69392826	Wrap53|NM_144824	0	-
chr11	71031999	71032030	9	1	-	chr11	70966603	71044235	Nlrp1b|NM_001040696	0	-
chr11	72990406	72990450	7	2	-	chr11	72989004	72990510	Tmem93|NM_001168470	0	-
chr11	72990406	72990450	7	2	-	chr11	72989004	72990544	Tmem93|NM_025318	0	-
chr11	76030985	76031048	5	1	-	chr11	76024072	76031074	Gemin4|NM_177367	0	-
chr11	76916310	76916340	5	1	-	chr11	76903416	77002470	Efcab5|NM_176965	0	-
chr11	87800841	87800897	8	1	-	chr11	87793026	87801035	Dynll2|NM_026556	0	-
chr11	87800841	87800897	8	1	-	chr11	87793026	87811800	Dynll2|NM_001168471	0	-
chr11	99081030	99081080	5	4	-	chr11	99070361	99092331	Smarce1|NM_020618	0	-
chr11	102154614	102154639	11	1	-	chr11	102150613	102157943	Atxn7l3|NM_001098837	0	-
chr11	102154614	102154639	11	1	-	chr11	102150613	102157943	Atxn7l3|NM_001098836	0	-
chr11	102665669	102665710	5	1	-	chr11	102660791	102666333	Gjc1|NM_008122	0	-
chr11	102665669	102665710	5	1	-	chr11	102660791	102681000	Gjc1|NM_001159383	0	-
chr11	102665669	102665710	5	1	-	chr11	102660791	102680473	Gjc1|NM_001159382	0	-
chr11	113612398	113612438	11	2	-	chr11	113588163	113612474	Cdc42ep4|NM_020006	0	-
chr11	113612398	113612438	11	2	-	chr11	113588163	113613129	Cdc42ep4|NM_001163346	0	-
chr11	117907557	117907587	10	1	-	chr11	117883036	117990533	Dnahc17|NM_001167746	0	-
chr12	81745524	81745552	12	3	+	chr12	81745201	81784329	Slc39a9|NM_026244	0	+
chr12	29232086	29232139	5	2	-	chr12	29122659	29233202	Dcdc2c|NM_001177964	0	-
chr12	71119858	71119889	34	2	-	chr12	71112421	71203841	Nin|NM_001081453	0	-
chr12	71119858	71119889	34	2	-	chr12	71119726	71212912	Nin|NM_008697	0	-
chr12	81223683	81223715	13	1	-	chr12	81221532	81233831	2310015A10Rik|NR_033514	0	-
chr12	82593621	82593667	7	5	-	chr12	82593180	82633894	Synj2bp|NM_025292	0	-
chr12	82595142	82595198	12	1	-	chr12	82593180	82633894	Synj2bp|NM_025292	0	-
chr12	82595248	82595271	7	2	-	chr12	82593180	82633894	Synj2bp|NM_025292	0	-
chr12	82596128	82596153	10	5	-	chr12	82593180	82633894	Synj2bp|NM_025292	0	-
chr12	85740343	85740375	12	5	-	chr12	85714806	85749979	Entpd5|NM_007647	0	-
chr12	85740343	85740375	12	5	-	chr12	85714806	85749979	Entpd5|NM_001026214	0	-
chr12	86271420	86271446	14	1	-	chr12	86259098	86311836	1110018G07Rik|NM_178065	0	-
chr12	114067508	114067554	11	1	-	chr12	114058445	114067600	Cdca4|NM_028023	0	-
chr13	36296388	36296410	6	1	+	chr13	36209279	36629462	Fars2|NM_024274	0	+
chr13	36296388	36296410	6	1	+	chr13	36209279	36629462	Fars2|NM_001039189	0	+
chr13	56804890	56804929	5	1	+	chr13	56804412	56843739	Smad5|NM_001164041	0	+
chr13	56804890	56804929	5	1	+	chr13	56804370	56843739	Smad5|NM_008541	0	+
chr13	73765920	73765966	8	3	+	chr13	73764448	73786489	Tert|NM_009354	0	+
chr13	46859997	46860031	27	14	-	chr13	46844456	47025087	Kif13a|NM_010617	0	-
chr13	97253505	97253531	21	3	-	chr13	97250643	97312440	Polk|NM_012048	0	-
chr13	101311128	101311159	17	1	-	chr13	101267321	101322453	Ocln|NM_008756	0	-
chr13	101322342	101322386	10	1	-	chr13	101267321	101322453	Ocln|NM_008756	0	-
chr13	115878931	115878955	6	17	-	chr13	115878562	115880366	Pelo|NM_134058	0	-
chr13	115878931	115878955	6	17	-	chr13	115748288	115892172	Itga1|NM_001033228	0	-
chr13	115878961	115878995	23	17	-	chr13	115878562	115880366	Pelo|NM_134058	0	-
chr13	115878961	115878995	23	17	-	chr13	115748288	115892172	Itga1|NM_001033228	0	-
chr14	33135251	33135307	112	44	+	chr14	33135204	33161006	Ogdhl|NM_001081130	0	+
chr14	55714275	55714299	6	2	+	chr14	55713620	55717832	Thtpa|NM_153083	0	+
chr14	64479261	64479288	6	1	+	chr14	64479148	64538696	Pinx1|NM_028228	0	+
chr14	64712626	64712670	7	1	+	chr14	64712532	64716509	Prss51|NM_001193631	0	+
chr14	69968933	69968987	18	1	+	chr14	69955207	69984799	Entpd4|NM_026174	0	+
chr14	102284720	102284780	15	1	+	chr14	102129144	102333910	Lmo7|NM_201529	0	+
chr14	7859930	7859961	17	2	-	chr14	7838628	7859963	Gm10406|NM_001164727	0	-
chr14	21521712	21521735	12	1	-	chr14	21521233	21522321	6230400D17Rik|NR_029446	0	-
chr14	24622417	24622440	32	3	-	chr14	24117982	24823427	Kcnma1|NM_010610	0	-
chr14	37754412	37754451	17	2	-	chr14	37688121	37781950	Gcap14|NM_027045	0	-
chr14	55567933	55567972	7	2	-	chr14	55567896	55567979	Mir208a|NR_029724	0	-
chr14	55567933	55567972	7	2	-	chr14	55560757	55585444	Myh6|NM_001164171	0	-
chr14	55567933	55567972	7	2	-	chr14	55560757	55585444	Myh6|NM_010856	0	-
chr14	60012146	60012190	10	1	-	chr14	59999669	60012349	Gm6907|NM_001164289	0	-
chr14	65522135	65522157	5	1	-	chr14	65441054	65568684	Hmbox1|NM_177338	0	-
chr14	65872293	65872317	8	1	-	chr14	65811277	65881300	Fzd3|NM_021458	0	-
chr14	70205064	70205109	6	1	-	chr14	70184796	70205352	Rhobtb2|NM_153514	0	-
chr14	70842947	70843008	17	1	-	chr14	70838554	70843034	Polr3d|NM_001164082	0	-
chr14	70842947	70843008	17	1	-	chr14	70838554	70843278	Polr3d|NM_025945	0	-
chr14	70886538	70886653	7	1	-	chr14	70874361	70920067	Bmp1|NR_033241	0	-
chr14	70886538	70886653	7	1	-	chr14	70874361	70920067	Bmp1|NM_009755	0	-
chr14	79012719	79012763	9	1	-	chr14	78969415	79124896	Dgkh|NM_001081336	0	-
chr14	118516217	118516250	6	1	-	chr14	118511132	118531987	Tgds|NM_029578	0	-
chr14	122834099	122834125	8	3	-	chr14	122834075	122850337	Gm5089|NR_033325	0	-
chr14	122834099	122834125	8	3	-	chr14	122764900	122850368	Gm5089|NR_033326	0	-
chr14	122834817	122834839	19	2	-	chr14	122834075	122850337	Gm5089|NR_033325	0	-
chr14	122834817	122834839	19	2	-	chr14	122764900	122850368	Gm5089|NR_033326	0	-
chr14	122835393	122835432	16	1	-	chr14	122834075	122850337	Gm5089|NR_033325	0	-
chr14	122835393	122835432	16	1	-	chr14	122764900	122850368	Gm5089|NR_033326	0	-
chr14	122835706	122835788	5	1	-	chr14	122834075	122850337	Gm5089|NR_033325	0	-
chr14	122835706	122835788	5	1	-	chr14	122764900	122850368	Gm5089|NR_033326	0	-
chr15	21041210	21041240	7	2	+	chr15	21041206	21519288	Cdh12|NM_001008420	0	+
chr15	75447320	75447342	11	1	+	chr15	75447114	75455725	Zfp41|NM_011759	0	+
chr15	75447320	75447342	11	1	+	chr15	75447114	75455725	Zfp41|NM_001044718	0	+
chr15	76308127	76308151	6	1	+	chr15	76307874	76331402	Hsf1|NM_008296	0	+
chr15	85566023	85566077	23	3	+	chr15	85565993	85637281	Ppara|NM_001113418	0	+
chr15	101114957	101114983	7	1	+	chr15	101114731	101121365	9430023L20Rik|NM_026566	0	+
chr15	44583696	44583722	8	1	-	chr15	44503402	44584004	Sybu|NM_178765	0	-
chr15	44583696	44583722	8	1	-	chr15	44503402	44619609	Sybu|NM_176998	0	-
chr15	44583696	44583722	8	1	-	chr15	44503402	44619609	Sybu|NM_001032727	0	-
chr15	46288729	46288753	7	1	-	chr15	46267411	46327725	4930523O13Rik|NR_040451	0	-
chr15	55370684	55370715	12	4	-	chr15	55365649	55388867	Mrpl13|NM_026759	0	-
chr15	58737359	58737383	41	6	-	chr15	58721707	58765285	Tatdn1|NM_175151	0	-
chr15	76455601	76455640	9	2	-	chr15	76452517	76456457	Vps28|NM_025842	0	-
chr15	76465062	76465090	9	6	-	chr15	76456666	76470359	Tonsl|NM_183091	0	-
chr15	79269220	79269308	11	1	-	chr15	79248281	79272487	Csnk1e|NM_013767	0	-
chr15	83188531	83188558	14	2	-	chr15	83184276	83197727	1700001L05Rik|NR_027980	0	-
chr15	85408212	85408280	8	2	-	chr15	85365866	85412251	Wnt7b|NM_009528	0	-
chr15	85408212	85408280	8	2	-	chr15	85365866	85408500	Wnt7b|NM_001163634	0	-
chr15	85408212	85408280	8	2	-	chr15	85365866	85411159	Wnt7b|NM_001163633	0	-
chr15	89414758	89414779	24	8	-	chr15	89412957	89422354	Rabl2|NM_026817	0	-
chr15	89416702	89416743	5	1	-	chr15	89412957	89422354	Rabl2|NM_026817	0	-
chr15	96471619	96471664	32	4	-	chr15	96401848	96473344	Slc38a1|NM_001166458	0	-
chr15	96471619	96471664	32	4	-	chr15	96401848	96472393	Slc38a1|NM_134086	0	-
chr15	96471619	96471664	32	4	-	chr15	96401848	96472774	Slc38a1|NM_001166456	0	-
chr15	98350187	98350209	5	1	-	chr15	98350147	98350265	Snora34|NR_034051	0	-
chr15	98350187	98350209	5	1	-	chr15	98349531	98364652	2310037I24Rik|NM_133714	0	-
chr15	103045537	103045563	7	1	-	chr15	103021976	103045783	Cbx5|NM_001110216	0	-
chr15	103045537	103045563	7	1	-	chr15	103021976	103045783	Cbx5|NM_007626	0	-
chr15	103045537	103045563	7	1	-	chr15	103021976	103070247	Cbx5|NM_001076789	0	-
chr15	103187379	103187422	18	1	-	chr15	103174717	103197179	Itga5|NM_010577	0	-
chr16	17491441	17491466	6	3	+	chr16	17489783	17507575	Aifm3|NM_175178	0	+
chr16	31879008	31879070	6	3	+	chr16	31878895	31899105	Mfi2|NM_013900	0	+
chr16	32247426	32247449	7	1	+	chr16	32247338	32257169	Wdr53|NM_026898	0	+
chr16	32247426	32247449	7	1	+	chr16	32247312	32257169	Wdr53|NM_001185162	0	+
chr16	72980191	72980223	8	1	+	chr16	72663393	73046345	Robo1|NM_019413	0	+
chr16	4670543	4670590	6	1	-	chr16	4626883	4679720	Coro7|NM_030205	0	-
chr16	8738327	8738378	19	1	-	chr16	8688814	8738435	Usp7|NM_001003918	0	-
chr16	13667687	13667719	6	1	-	chr16	13538056	13668263	Parn|NM_028761	0	-
chr16	17124194	17124221	28	37	-	chr16	17124153	17124235	Mir130b|NR_029659	0	-
chr16	17124194	17124221	28	37	-	chr16	17113490	17125199	2610318N02Rik|NM_183287	0	-
chr16	20285881	20285914	26	2	-	chr16	20279893	20302435	Parl|NM_001005767	0	-
chr16	20709987	20710024	6	1	-	chr16	20703038	20716709	Clcn2|NM_009900	0	-
chr16	20729270	20729294	9	2	-	chr16	20724526	20734584	Thpo|NM_009379	0	-
chr16	20729270	20729294	9	2	-	chr16	20724526	20730671	Thpo|NM_001173505	0	-
chr16	43878111	43878153	5	1	-	chr16	43861525	43889789	Qtrtd1|NM_029128	0	-
chr16	45801722	45801744	5	8	-	chr16	45746345	45844491	Phldb2|NM_153412	0	-
chr16	58928208	58928265	8	1	-	chr16	58925382	58928470	Olfr181|NM_146999	0	-
chr16	97675747	97675780	11	1	-	chr16	97668641	97684513	Mx1|NR_003520	0	-
chr16	97675747	97675780	11	1	-	chr16	97668643	97684512	Mx1|NM_010846	0	-
chr17	29090266	29090301	19	2	+	chr17	29090160	29104882	Kctd20|NM_025888	0	+
chr17	34987562	34987597	60	17	+	chr17	34987335	34993317	Rdbp|NM_001045864	0	+
chr17	34987562	34987597	60	17	+	chr17	34987335	34993317	Rdbp|NM_138580	0	+
chr17	34987562	34987597	60	17	+	chr17	34987335	34993317	Rdbp|NM_001045863	0	+
chr17	74889099	74889136	7	1	+	chr17	74888832	74899617	Yipf4|NM_026417	0	+
chr17	93598773	93598802	60	8	+	chr17	93598761	93604829	Adcyap1|NM_009625	0	+
chr17	23781127	23781149	5	1	-	chr17	23766424	23782236	Mmp25|NM_001033339	0	-
chr17	23972247	23972274	7	1	-	chr17	23970327	23972734	Prss33|NM_001081399	0	-
chr17	24341428	24341451	37	12	-	chr17	24340790	24346332	Ntn3|NM_010947	0	-
chr17	24341428	24341451	37	12	-	chr17	24312375	24342507	Tbc1d24|NM_001163847	0	-
chr17	24341428	24341451	37	12	-	chr17	24312375	24342507	Tbc1d24|NM_173186	0	-
chr17	24341428	24341451	37	12	-	chr17	24312375	24342507	Tbc1d24|NM_001163851	0	-
chr17	24341428	24341451	37	12	-	chr17	24312375	24342507	Tbc1d24|NM_001163850	0	-
chr17	24341428	24341451	37	12	-	chr17	24312375	24342507	Tbc1d24|NM_001163849	0	-
chr17	24341428	24341451	37	12	-	chr17	24312375	24342507	Tbc1d24|NM_001163848	0	-
chr17	24341900	24341952	11	2	-	chr17	24340790	24346332	Ntn3|NM_010947	0	-
chr17	24341900	24341952	11	2	-	chr17	24312375	24342507	Tbc1d24|NM_001163847	0	-
chr17	24341900	24341952	11	2	-	chr17	24312375	24342507	Tbc1d24|NM_173186	0	-
chr17	24341900	24341952	11	2	-	chr17	24312375	24342507	Tbc1d24|NM_001163851	0	-
chr17	24341900	24341952	11	2	-	chr17	24312375	24342507	Tbc1d24|NM_001163850	0	-
chr17	24341900	24341952	11	2	-	chr17	24312375	24342507	Tbc1d24|NM_001163849	0	-
chr17	24341900	24341952	11	2	-	chr17	24312375	24342507	Tbc1d24|NM_001163848	0	-
chr17	25933293	25933344	5	1	-	chr17	25931515	25933990	Metrn|NM_133719	0	-
chr17	26039037	26039072	21	2	-	chr17	26038800	26039172	Gm10012|NR_028042	0	-
chr17	26039037	26039072	21	2	-	chr17	26019058	26056659	Rab40c|NM_139154	0	-
chr17	26039092	26039157	5	1	-	chr17	26038800	26039172	Gm10012|NR_028042	0	-
chr17	26039092	26039157	5	1	-	chr17	26019058	26056659	Rab40c|NM_139154	0	-
chr17	26081232	26081270	6	1	-	chr17	26079177	26081876	Nhlrc4|NM_001039038	0	-
chr17	27158225	27158306	5	1	-	chr17	27156756	27165571	Bak1|NM_007523	0	-
chr17	27158225	27158306	5	1	-	chr17	27156756	27165571	Bak1|NM_007523	0	-
chr17	28487019	28487083	5	1	-	chr17	28468617	28487291	Tead3|NM_001204156	0	-
chr17	28487019	28487083	5	1	-	chr17	28468617	28487750	Tead3|NM_011566	0	-
chr17	28487019	28487083	5	1	-	chr17	28468617	28487545	Tead3|NM_001098226	0	-
chr17	31633854	31633877	10	1	-	chr17	31631266	31649432	Wdr4|NM_021322	0	-
chr17	32443522	32443547	9	2	-	chr17	32440620	32458098	Akap8|NM_019774	0	-
chr17	34952169	34952199	5	1	-	chr17	34946036	34960399	C4a|NM_011413	0	-
chr17	47117513	47117536	27	4	-	chr17	47065239	47147481	Ubr2|NM_146078	0	-
chr17	47117513	47117536	27	4	-	chr17	47065239	47147481	Ubr2|NM_001177374	0	-
chr17	63840211	63840245	10	1	-	chr17	63395300	63849929	Fbxl17|NM_015794	0	-
chr17	71195849	71195876	16	1	-	chr17	71193544	71196117	Tgif1|NM_001164077	0	-
chr17	71195849	71195876	16	1	-	chr17	71193544	71200550	Tgif1|NM_009372	0	-
chr17	71195849	71195876	16	1	-	chr17	71193544	71199130	Tgif1|NM_001164076	0	-
chr17	71195849	71195876	16	1	-	chr17	71193544	71201074	Tgif1|NM_001164075	0	-
chr17	71195849	71195876	16	1	-	chr17	71193544	71202872	Tgif1|NM_001164074	0	-
chr17	74242981	74243057	5	1	-	chr17	74233247	74299522	Xdh|NM_011723	0	-
chr18	23912283	23912328	8	1	+	chr18	23910833	24052362	Mapre2|NM_001162942	0	+
chr18	23912283	23912328	8	1	+	chr18	23912225	24052362	Mapre2|NM_001162941	0	+
chr18	31920346	31920393	24	2	+	chr18	31919477	31943737	Ammecr1l|NM_153515	0	+
chr18	31920346	31920393	24	2	+	chr18	31920269	31943737	Ammecr1l|NM_001242430	0	+
chr18	34784769	34784826	8	1	+	chr18	34784277	34792931	Kif20a|NM_001166407	0	+
chr18	34784769	34784826	8	1	+	chr18	34784686	34792931	Kif20a|NM_001166406	0	+
chr18	34784769	34784826	8	1	+	chr18	34784589	34792931	Kif20a|NM_009004	0	+
chr18	37975155	37975193	13	1	+	chr18	37915426	38001526	Pcdhga11|NM_033594	0	+
chr18	37975155	37975193	13	1	+	chr18	37896589	38001517	Pcdhga9|NM_033592	0	+
chr18	37975155	37975193	13	1	+	chr18	37880207	38001524	Pcdhgb4|NM_033576	0	+
chr18	37975155	37975193	13	1	+	chr18	37890807	38001524	Pcdhgb5|NM_033577	0	+
chr18	37975155	37975193	13	1	+	chr18	37906841	38001524	Pcdhga10|NM_033593	0	+
chr18	37975155	37975193	13	1	+	chr18	37921454	38001526	Pcdhgb8|NM_033580	0	+
chr18	37975155	37975193	13	1	+	chr18	37911432	38001524	Pcdhgb7|NM_033579	0	+
chr18	37975155	37975193	13	1	+	chr18	37925233	38001526	Pcdhga12|NM_033595	0	+
chr18	37975155	37975193	13	1	+	chr18	37974732	38001526	Pcdhgc4|NM_033582	0	+
chr18	37975155	37975193	13	1	+	chr18	37966063	38001526	Pcdhgc3|NM_033581	0	+
chr18	37975155	37975193	13	1	+	chr18	37901747	38001526	Pcdhgb6|NM_033578	0	+
chr18	37975155	37975193	13	1	+	chr18	37885359	38001526	Pcdhga8|NM_033591	0	+
chr18	37975155	37975193	13	1	+	chr18	37821598	38001524	Pcdhga1|NM_033584	0	+
chr18	37975155	37975193	13	1	+	chr18	37828758	38001524	Pcdhga2|NM_033585	0	+
chr18	37975155	37975193	13	1	+	chr18	37840111	38001524	Pcdhgb1|NM_033574	0	+
chr18	37975155	37975193	13	1	+	chr18	37845053	38001524	Pcdhga4|NM_033587	0	+
chr18	37975155	37975193	13	1	+	chr18	37854154	38001524	Pcdhga5|NM_033588	0	+
chr18	37975155	37975193	13	1	+	chr18	37866882	38001524	Pcdhga6|NM_033589	0	+
chr18	37975155	37975193	13	1	+	chr18	37874487	38001526	Pcdhga7|NM_033590	0	+
chr18	37975155	37975193	13	1	+	chr18	37833988	38001526	Pcdhga3|NM_033586	0	+
chr18	37975155	37975193	13	1	+	chr18	37849512	38001526	Pcdhgb2|NM_033575	0	+
chr18	37975155	37975193	13	1	+	chr18	37112394	37999854	Pcdha4-g|NM_001174154	0	+
chr18	74376111	74376143	17	1	+	chr18	74375865	74381145	Cxxc1|NM_028868	0	+
chr18	34726774	34726828	10	1	-	chr18	34722294	34738760	Nme5|NM_080637	0	-
chr18	43532809	43532854	8	7	-	chr18	43483935	43552985	Dpysl3|NM_009468	0	-
chr18	43532809	43532854	8	7	-	chr18	43483880	43532926	Dpysl3|NM_001136086	0	-
chr18	61872975	61873031	9	1	-	chr18	61872077	61885985	Grpel2|NM_021296	0	-
chr18	66218234	66218263	7	3	-	chr18	66216509	66451492	Ccbe1|NM_178793	0	-
chr18	66218505	66218654	31	2	-	chr18	66216509	66451492	Ccbe1|NM_178793	0	-
chr18	66218505	66218654	31	4	-	chr18	66216509	66451492	Ccbe1|NM_178793	0	-
chr18	67591402	67591446	6	1	-	chr18	67564417	67608790	Afg3l2|NM_027130	0	-
chr18	73816849	73816887	16	1	-	chr18	73798666	73863395	Smad4|NM_008540	0	-
chr18	80339442	80339528	20	3	-	chr18	80323873	80348221	Adnp2|NM_175028	0	-
chr18	84809728	84809759	7	2	-	chr18	84779900	84819487	Cndp1|NM_177450	0	-
chr19	4100666	4100701	11	1	+	chr19	4100116	4113965	Pitpnm1|NM_001136078	0	+
chr19	4100666	4100701	11	1	+	chr19	4100621	4113961	Pitpnm1|NM_008851	0	+
chr19	4878715	4878744	16	1	+	chr19	4878689	4885397	Zdhhc24|NM_001168517	0	+
chr19	4878715	4878744	16	1	+	chr19	4878667	4885397	Zdhhc24|NM_001168516	0	+
chr19	4878715	4878744	16	1	+	chr19	4878667	4885397	Zdhhc24|NM_027476	0	+
chr19	12714337	12714372	11	1	+	chr19	12707797	12726227	Glyat|NM_145935	0	+
chr19	29326974	29327022	5	1	+	chr19	29326317	29387570	Jak2|NM_001048177	0	+
chr19	29326974	29327022	5	1	+	chr19	29326317	29387570	Jak2|NM_008413	0	+
chr19	40905851	40905937	19	1	+	chr19	40905768	40923060	Ccnj|NM_172839	0	+
chr19	41625936	41626006	14	3	+	chr19	41624128	41634271	Lcor|NM_172154	0	+
chr19	41625936	41626006	14	1	+	chr19	41624128	41634271	Lcor|NM_172154	0	+
chr19	42245257	42245287	5	1	+	chr19	42245056	42269082	Zfyve27|NM_177319	0	+
chr19	42245257	42245287	5	1	+	chr19	42245056	42269082	Zfyve27|NM_001164531	0	+
chr19	5907124	5907162	7	1	-	chr19	5897134	5912866	Dpf2|NM_011262	0	-
chr19	15998846	15998878	8	2	-	chr19	15979612	15999112	Psat1|NM_001205339	0	-
chr19	15998846	15998878	8	2	-	chr19	15979612	15999549	Psat1|NM_177420	0	-
chr19	16715113	16715206	8	1	-	chr19	16691163	16855417	Vps13a|NM_173028	0	-
chr19	16716114	16716182	13	1	-	chr19	16691163	16855417	Vps13a|NM_173028	0	-
chr19	29578950	29579002	18	1	-	chr19	29578152	29596477	A930007I19Rik|NR_015567	0	-
chr19	31288201	31288246	9	2	-	chr19	31288032	31290886	8430431K14Rik|NR_002849	0	-
chr19	31288201	31288246	9	2	-	chr19	30638976	31738860	Prkg1|NM_011160	0	-
chr19	31288201	31288246	9	2	-	chr19	30638976	31839523	Prkg1|NM_001013833	0	-
chr19	34895190	34895234	8	1	-	chr19	34895176	34895263	Mir107|NR_029783	0	-
chr19	34895190	34895234	8	1	-	chr19	34885383	34952407	Pank1|NM_023792	0	-
chr19	34895190	34895234	8	1	-	chr19	34885383	34953945	Pank1|NM_001114339	0	-
chr19	34895190	34895234	8	1	-	chr19	34895176	34895263	Mir107|NR_029783	0	-
chr19	34895190	34895234	8	1	-	chr19	34885383	34952407	Pank1|NM_023792	0	-
chr19	34895190	34895234	8	1	-	chr19	34885383	34953945	Pank1|NM_001114339	0	-
chr19	36760076	36760107	5	3	-	chr19	36693907	36763969	1500017E21Rik|NR_033510	0	-
chr19	37281739	37281765	25	4	-	chr19	37095780	37281783	Cpeb3|NM_198300	0	-
chr19	38296375	38296419	12	1	-	chr19	38262968	38298622	5730455O13Rik|NM_001081075	0	-
chr19	45857637	45857705	17	8	-	chr19	45824748	45857781	Mgea5|NM_023799	0	-
chr2	3035672	3035727	17	1	+	chr2	3035659	3145081	Fam171a1|NM_001081161	0	+
chr2	69490861	69490914	10	2	+	chr2	69485311	69505626	Bbs5|NM_028284	0	+
chr2	112219502	112219525	8	1	+	chr2	112219367	112254394	2410042D21Rik|NM_024254	0	+
chr2	119862253	119862277	9	1	+	chr2	119859168	119868768	Pla2g4b|NM_145378	0	+
chr2	177927881	177927909	133	7	+	chr2	177910053	178073197	Phactr3|NM_001177791	0	+
chr2	177927881	177927909	133	7	+	chr2	177853679	178073197	Phactr3|NM_001177789	0	+
chr2	177927881	177927909	133	7	+	chr2	177853679	178073197	Phactr3|NM_001177790	0	+
chr2	177927881	177927909	133	7	+	chr2	177876637	178073197	Phactr3|NM_028806	0	+
chr2	177927881	177927909	133	7	+	chr2	177927788	178073197	Phactr3|NM_001007154	0	+
chr2	180195783	180195850	6	2	+	chr2	180195682	180209557	Slco4a1|NM_148933	0	+
chr2	181116296	181116334	10	2	+	chr2	181115939	181118333	Lime1|NM_023684	0	+
chr2	181531437	181531470	10	1	+	chr2	181498036	181562480	Myt1|NM_001171615	0	+
chr2	181531437	181531470	10	1	+	chr2	181501733	181562480	Myt1|NM_008665	0	+
chr2	181531437	181531470	10	1	+	chr2	181531011	181562480	Myt1|NM_001171680	0	+
chr2	181531437	181531470	10	1	+	chr2	181501733	181562480	Myt1|NM_001171616	0	+
chr2	3329260	3329294	5	1	-	chr2	3326314	3339920	Meig1|NM_008579	0	-
chr2	6846582	6846618	36	5	-	chr2	6843747	6849768	5031426D15Rik|NR_027890	0	-
chr2	6846582	6846618	36	5	-	chr2	6460743	7002348	Celf2|NM_001110229	0	-
chr2	6846582	6846618	36	5	-	chr2	6460743	7002348	Celf2|NM_001110230	0	-
chr2	6846582	6846618	36	5	-	chr2	6460743	7317627	Celf2|NM_001110232	0	-
chr2	6846582	6846618	36	5	-	chr2	6460743	7002348	Celf2|NM_001160292	0	-
chr2	6846582	6846618	36	5	-	chr2	6460743	7317825	Celf2|NM_001110231	0	-
chr2	6847942	6847979	6	2	-	chr2	6843747	6849768	5031426D15Rik|NR_027890	0	-
chr2	6847942	6847979	6	2	-	chr2	6460743	7002348	Celf2|NM_001110229	0	-
chr2	6847942	6847979	6	2	-	chr2	6460743	7002348	Celf2|NM_001110230	0	-
chr2	6847942	6847979	6	2	-	chr2	6460743	7317627	Celf2|NM_001110232	0	-
chr2	6847942	6847979	6	2	-	chr2	6460743	7002348	Celf2|NM_001160292	0	-
chr2	6847942	6847979	6	2	-	chr2	6460743	7317825	Celf2|NM_001110231	0	-
chr2	10001424	10001472	7	1	-	chr2	9977658	10002137	Atp5c1|NM_001112738	0	-
chr2	10001424	10001472	7	1	-	chr2	9977658	10002137	Atp5c1|NM_020615	0	-
chr2	11691536	11691561	14	2	-	chr2	11664199	11699154	Fbxo18|NM_015792	0	-
chr2	25184223	25184247	29	2	-	chr2	25182969	25188091	AA543186|NR_027448	0	-
chr2	29102324	29102367	16	1	-	chr2	29100635	29108513	6530402F18Rik|NR_029460	0	-
chr2	29102324	29102367	16	1	-	chr2	29050340	29103560	Ntng2|NM_133500	0	-
chr2	29102324	29102367	16	1	-	chr2	29050340	29103560	Ntng2|NM_133501	0	-
chr2	32143549	32143585	54	5	-	chr2	32134335	32143588	Swi5|NM_175190	0	-
chr2	37292514	37292538	15	1	-	chr2	37287687	37298641	Zbtb26|NM_199025	0	-
chr2	51788036	51788061	14	1	-	chr2	51779968	51790164	Rbm43|NM_001141982	0	-
chr2	51788036	51788061	14	1	-	chr2	51779968	51790529	Rbm43|NM_001141981	0	-
chr2	51788036	51788061	14	1	-	chr2	51779968	51790529	Rbm43|NM_030243	0	-
chr2	125444257	125444282	15	2	-	chr2	125388823	125450849	Cep152|NM_001081091	0	-
chr2	139892300	139892371	19	1	-	chr2	139659215	139892521	Tasp1|NM_001159640	0	-
chr2	139892300	139892371	19	1	-	chr2	139659215	139892521	Tasp1|NM_001159641	0	-
chr2	139892300	139892371	19	1	-	chr2	139659215	139892496	Tasp1|NM_175225	0	-
chr2	140055773	140055795	5	8	-	chr2	140055593	140215446	Sel1l2|NM_001033296	0	-
chr2	140088432	140088461	12	1	-	chr2	140055593	140215446	Sel1l2|NM_001033296	0	-
chr2	156004969	156004992	5	1	-	chr2	155972974	156005976	Rbm39|NM_133242	0	-
chr2	163896482	163896518	5	2	-	chr2	163879276	163896838	Tomm34|NM_025996	0	-
chr2	165142145	165142205	60	3	-	chr2	165116611	165142393	Elmo2|NM_207705	0	-
chr2	165142145	165142205	60	3	-	chr2	165113530	165151979	Elmo2|NM_207706	0	-
chr2	165142145	165142205	60	3	-	chr2	165113530	165151979	Elmo2|NM_080287	0	-
chr3	30502540	30502617	17	1	+	chr3	30501008	30517416	Mynn|NM_030557	0	+
chr3	85379896	85379941	6	1	+	chr3	85378050	85458392	Pet112l|NM_144896	0	+
chr3	88383640	88383677	6	1	+	chr3	88383592	88392335	Ssr2|NM_025448	0	+
chr3	101814971	101815000	5	1	+	chr3	101814067	101819415	Nhlh2|NM_178777	0	+
chr3	131227936	131227960	9	4	+	chr3	131227731	131306635	Papss1|NM_011863	0	+
chr3	145239227	145239269	11	1	+	chr3	145239171	145268209	Znhit6|NM_001081094	0	+
chr3	32883932	32883953	9	1	-	chr3	32848552	32884001	Pex5l|NM_001163517	0	-
chr3	32883932	32883953	9	1	-	chr3	32848552	33042004	Pex5l|NM_001163516	0	-
chr3	32883932	32883953	9	1	-	chr3	32848552	32981958	Pex5l|NM_021483	0	-
chr3	78908039	78908063	8	1	-	chr3	78866450	78949797	Rapgef2|NM_001099624	0	-
chr3	85477295	85477354	6	1	-	chr3	85463984	85550131	Fam160a1|NM_172682	0	-
chr3	85480124	85480196	12	1	-	chr3	85463984	85550131	Fam160a1|NM_172682	0	-
chr3	94812112	94812145	13	2	-	chr3	94810623	94819160	Zfp687|NM_030074	0	-
chr3	103594972	103595136	38	3	-	chr3	103543737	103595198	Hipk1|NM_010432	0	-
chr3	107889222	107889296	9	1	-	chr3	107876979	107889545	Ampd2|NM_028779	0	-
chr3	113277607	113277629	6	1	-	chr3	113258869	113277680	Amy1|NM_007446	0	-
chr3	113277607	113277629	6	1	-	chr3	113258869	113280668	Amy1|NM_001110505	0	-
chr3	130433140	130433170	9	3	-	chr3	130429754	130433247	Rpl34-ps1|NM_001199350	0	-
chr3	130433140	130433170	9	3	-	chr3	130429748	130433226	Rpl34|NM_026724	0	-
chr3	135257303	135257358	10	1	-	chr3	135247618	135354511	Nfkb1|NM_008689	0	-
chr3	145766169	145766191	5	1	-	chr3	145703489	145771000	Wdr63|NM_172864	0	-
chr4	32702446	32702473	7	1	+	chr4	32702447	32740240	Casp8ap2|NM_011997	0	+
chr4	32702446	32702473	7	1	+	chr4	32702447	32740240	Casp8ap2|NM_001122978	0	+
chr4	48553073	48553103	6	1	+	chr4	48552817	48574792	5730528L13Rik|NM_001145925	0	+
chr4	48553073	48553103	6	1	+	chr4	48552952	48574792	5730528L13Rik|NM_001145924	0	+
chr4	101927386	101927459	35	3	+	chr4	101927346	102228529	Pde4b|NM_001177983	0	+
chr4	102433032	102433074	130	9	+	chr4	102432967	102643782	Sgip1|NM_144906	0	+
chr4	128404837	128404888	15	1	+	chr4	128331945	128430125	Phc2|NM_001195130	0	+
chr4	128404837	128404888	15	1	+	chr4	128365981	128430125	Phc2|NM_018774	0	+
chr4	128404837	128404888	15	1	+	chr4	128404814	128430125	Phc2|NM_001195083	0	+
chr4	25207897	25207934	5	2	-	chr4	25175732	25208968	1810074P20Rik|NM_026194	0	-
chr4	44085491	44085541	5	1	-	chr4	44049694	44085545	Gne|NM_001190414	0	-
chr4	44085491	44085541	5	1	-	chr4	44046946	44097049	Gne|NM_015828	0	-
chr4	58013164	58013195	26	2	-	chr4	57996900	58021996	Txndc8|NM_026132	0	-
chr4	131563331	131563374	11	2	-	chr4	131479343	131628012	Epb4.1|NM_183428	0	-
chr4	131563331	131563374	11	2	-	chr4	131479343	131604993	Epb4.1|NM_001128606	0	-
chr4	131563331	131563374	11	2	-	chr4	131479340	131631228	Epb4.1|NM_001128607	0	-
chr4	131627613	131627646	10	1	-	chr4	131479343	131628012	Epb4.1|NM_183428	0	-
chr4	131627613	131627646	10	1	-	chr4	131479340	131631228	Epb4.1|NM_001128607	0	-
chr4	131627976	131628004	5	1	-	chr4	131479343	131628012	Epb4.1|NM_183428	0	-
chr4	131627976	131628004	5	1	-	chr4	131479340	131631228	Epb4.1|NM_001128607	0	-
chr4	140969900	140969948	84	21	-	chr4	140960271	140971903	Clcnkb|NM_019701	0	-
chr5	13399325	13399354	12	1	+	chr5	13396783	13603485	Sema3a|NM_001243072	0	+
chr5	13399325	13399354	12	1	+	chr5	13398996	13603485	Sema3a|NM_001243073	0	+
chr5	13399325	13399354	12	1	+	chr5	13399308	13603485	Sema3a|NM_009152	0	+
chr5	53225577	53225647	11	2	+	chr5	53225373	53257973	Anapc4|NM_024213	0	+
chr5	65361348	65361396	8	1	+	chr5	65361313	65433140	Fam114a1|NM_026667	0	+
chr5	124889986	124890028	6	1	+	chr5	124889938	124912316	Setd8|NM_030241	0	+
chr5	130663120	130663223	53	8	+	chr5	130663049	130690207	Rabgef1|NM_019983	0	+
chr5	130663120	130663223	53	8	+	chr5	130647688	130690207	Rabgef1|NM_001199059	0	+
chr5	5513211	5513258	5	1	-	chr5	5505014	5514849	Cldn12|NM_001193661	0	-
chr5	5513211	5513258	5	1	-	chr5	5505014	5514789	Cldn12|NM_001193660	0	-
chr5	5513211	5513258	5	1	-	chr5	5505014	5514849	Cldn12|NM_001193659	0	-
chr5	5513211	5513258	5	1	-	chr5	5505014	5514976	Cldn12|NM_022890	0	-
chr5	22034617	22034642	8	1	-	chr5	22034038	22034848	Gm15421|NR_004442	0	-
chr5	22034617	22034642	8	1	-	chr5	21992306	22056149	Orc5|NM_011959	0	-
chr5	24811791	24811828	39	2	-	chr5	24777611	25004601	Mll3|NM_001081383	0	-
chr5	26806509	26806558	9	1	-	chr5	26786609	26819854	4930584F24Rik|NR_029445	0	-
chr5	31209997	31210034	7	1	-	chr5	31208890	31210095	Ost4|NM_001134692	0	-
chr5	31209997	31210034	7	1	-	chr5	31208890	31210161	Ost4|NM_024460	0	-
chr5	34979702	34979735	9	1	-	chr5	34976295	34979763	Mfsd10|NM_026660	0	-
chr5	72914897	72914926	5	1	-	chr5	72904542	72950884	Nfxl1|NM_133921	0	-
chr5	108153074	108153124	13	1	-	chr5	108145673	108153363	Gfi1|NM_010278	0	-
chr5	114204304	114204339	6	1	-	chr5	114192454	114221658	Sart3|NM_016926	0	-
chr5	114577896	114577925	13	5	-	chr5	114573942	114578185	Alkbh2|NM_175016	0	-
chr5	121985925	121985949	7	1	-	chr5	121975059	121995901	Mapkapk5|NM_010765	0	-
chr5	123930713	123930755	67	22	-	chr5	123930161	123932110	Il31|NM_029594	0	-
chr5	128080903	128080968	15	1	-	chr5	128076035	128097762	Slc15a4|NM_133895	0	-
chr5	130166719	130166759	6	2	-	chr5	130160469	130175963	Zfp11|NM_172462	0	-
chr5	147395920	147395970	6	2	-	chr5	147393725	147395980	Gpr12|NM_008151	0	-
chr5	147395920	147395970	6	2	-	chr5	147393725	147396815	Gpr12|NM_001010941	0	-
chr6	52195988	52196022	5	1	+	chr6	52195241	52199768	Hoxa11as|NR_015348	0	+
chr6	86388864	86388897	9	1	+	chr6	86388639	86420381	C87436|NR_027370	0	+
chr6	86388864	86388897	9	1	+	chr6	86388391	86420381	C87436|NR_027369	0	+
chr6	86388864	86388897	9	1	+	chr6	86388391	86420381	C87436|NM_146170	0	+
chr6	88852511	88852535	9	1	+	chr6	88852244	88862234	Tpra1|NM_011906	0	+
chr6	97941781	97941853	7	1	+	chr6	97941776	97971352	Mitf|NM_008601	0	+
chr6	97941781	97941853	7	1	+	chr6	97879810	97971352	Mitf|NM_001178049	0	+
chr6	97941781	97941853	7	1	+	chr6	97757051	97971352	Mitf|NM_001113198	0	+
chr6	113278585	113278621	8	1	+	chr6	113276969	113284180	Ogg1|NM_010957	0	+
chr6	125142358	125142408	9	2	+	chr6	125142217	125144410	Mrpl51|NM_025595	0	+
chr6	8457308	8457337	81	8	-	chr6	8457058	8459161	A430035B10Rik|NR_040452	0	-
chr6	8457349	8457412	13	1	-	chr6	8457058	8459161	A430035B10Rik|NR_040452	0	-
chr6	8457723	8457835	29	2	-	chr6	8457058	8459161	A430035B10Rik|NR_040452	0	-
chr6	29432892	29432947	5	1	-	chr6	29432035	29457952	Kcp|NM_001029985	0	-
chr6	36284571	36284627	7	1	-	chr6	36283137	36338234	9330158H04Rik|NR_015589	0	-
chr6	39590521	39590554	11	1	-	chr6	39553236	39675462	Braf|NM_139294	0	-
chr6	52260838	52260901	8	1	-	chr6	52258382	52264826	5730457N03Rik|NR_038163	0	-
chr6	52260838	52260901	8	1	-	chr6	52258382	52264826	5730457N03Rik|NR_038163	0	-
chr6	83647008	83647067	19	2	-	chr6	83642799	83662195	Vax2os2|NR_002871	0	-
chr6	92484681	92484716	7	1	-	chr6	92320885	92656178	Prickle2|NM_001081146	0	-
chr6	92484681	92484716	7	1	-	chr6	92320885	92517360	Prickle2|NM_001134461	0	-
chr6	92484681	92484716	7	1	-	chr6	92320885	92484855	Prickle2|NM_001134459	0	-
chr6	94557411	94557439	15	7	-	chr6	94554522	94650139	Lrig1|NM_008377	0	-
chr6	98978162	98978267	19	1	-	chr6	98875335	99385339	Foxp1|NM_053202	0	-
chr6	98978162	98978267	19	1	-	chr6	98875335	99216509	Foxp1|NM_001197321	0	-
chr6	98978162	98978267	19	1	-	chr6	98875335	98978292	Foxp1|NM_001197322	0	-
chr6	98978162	98978267	19	1	-	chr6	98875335	99385339	Foxp1|NM_053202	0	-
chr6	98978162	98978267	19	1	-	chr6	98875335	99216509	Foxp1|NM_001197321	0	-
chr6	98978162	98978267	19	1	-	chr6	98875335	98978292	Foxp1|NM_001197322	0	-
chr6	115993769	115993834	8	1	-	chr6	115968635	116143392	Tmcc1|NM_177412	0	-
chr6	119728081	119728108	6	1	-	chr6	119722724	119798168	Erc1|NM_178085	0	-
chr6	119728081	119728108	6	1	-	chr6	119520813	119798168	Erc1|NM_053204	0	-
chr6	136121894	136121919	15	4	-	chr6	135679822	136123529	Grin2b|NM_008171	0	-
chr6	148737647	148737696	138	12	-	chr6	148719205	148779989	Ipo8|NM_001081113	0	-
chr7	6948464	6948508	8	3	+	chr7	6948095	6955802	Aurkc|NM_020572	0	+
chr7	6948464	6948508	8	3	+	chr7	6948095	6955802	Aurkc|NM_001080965	0	+
chr7	6948464	6948508	8	3	+	chr7	6948095	6955802	Aurkc|NM_001080966	0	+
chr7	13066447	13066473	40	5	+	chr7	13063653	13068063	Zfp606|NM_001039951	0	+
chr7	13066447	13066473	40	5	+	chr7	13063653	13081584	Zfp606|NM_026112	0	+
chr7	13864706	13864742	13	1	+	chr7	13862661	13896776	Lig1|NM_001199310	0	+
chr7	13864706	13864742	13	1	+	chr7	13864613	13896776	Lig1|NM_001083188	0	+
chr7	13864706	13864742	13	1	+	chr7	13864174	13896776	Lig1|NM_010715	0	+
chr7	29603537	29603565	5	1	+	chr7	29595908	29607285	Hnrnpl|NM_177301	0	+
chr7	30960937	30960970	8	1	+	chr7	30954940	30965228	Gm5113|NM_001033540	0	+
chr7	51597514	51597566	6	1	+	chr7	51565633	51613723	Shank1|NM_001034115	0	+
chr7	51752064	51752101	9	1	+	chr7	51751957	51756504	Fam71e1|NM_028169	0	+
chr7	54102542	54102582	63	7	+	chr7	54102451	54110997	Ldha|NM_001136069	0	+
chr7	54102542	54102582	63	7	+	chr7	54101173	54110997	Ldha|NM_010699	0	+
chr7	87406426	87406448	6	1	+	chr7	87406100	87410264	Ngrn|NR_028053	0	+
chr7	87406426	87406448	6	1	+	chr7	87406100	87410264	Ngrn|NM_031375	0	+
chr7	105987641	105987710	11	1	+	chr7	105987354	106003257	Wnt11|NM_009519	0	+
chr7	105987641	105987710	11	1	+	chr7	105987354	106003257	Wnt11|NM_009519	0	+
chr7	105994889	105994925	6	1	+	chr7	105987354	106003257	Wnt11|NM_009519	0	+
chr7	125743803	125743842	43	3	+	chr7	125740810	125818599	Tmc5|NM_001105252	0	+
chr7	135391569	135391601	6	1	+	chr7	135390384	135397226	Tgfb1i1|NM_009365	0	+
chr7	137836223	137836277	8	1	+	chr7	137720997	137908298	Tacc2|NM_206856	0	+
chr7	137836223	137836277	8	1	+	chr7	137836069	137908298	Tacc2|NM_021314	0	+
chr7	137836223	137836277	8	1	+	chr7	137720997	137908296	Tacc2|NM_001004468	0	+
chr7	4383230	4383252	5	2	-	chr7	4377266	4397259	Rdh13|NM_175372	0	-
chr7	4966210	4966236	6	1	-	chr7	4958657	4966330	Fiz1|NM_001110329	0	-
chr7	4966210	4966236	6	1	-	chr7	4958657	4966299	Fiz1|NM_001110328	0	-
chr7	15194644	15194707	6	1	-	chr7	15146519	15208415	Vmn1r90|NM_001039146	0	-
chr7	20118139	20118169	18	2	-	chr7	20116315	20147747	Lrrc68|NM_199149	0	-
chr7	31229455	31229487	6	1	-	chr7	31219998	31230601	Aplp1|NM_007467	0	-
chr7	31512811	31512850	6	1	-	chr7	31512719	31514553	Tmem147|NM_027215	0	-
chr7	31739771	31739842	9	2	-	chr7	31730266	31741822	Usf2|NM_011680	0	-
chr7	59259341	59259375	10	1	-	chr7	59252530	59261388	Svip|NM_001160345	0	-
chr7	59259341	59259375	10	1	-	chr7	59252530	59261084	Svip|NR_027704	0	-
chr7	59260975	59261007	8	1	-	chr7	59252530	59261388	Svip|NM_001160345	0	-
chr7	59260975	59261007	8	1	-	chr7	59252530	59261084	Svip|NR_027704	0	-
chr7	67114466	67114489	7	1	-	chr7	67114462	67119317	D7Ertd715e|NR_015456	0	-
chr7	67114955	67115024	97	7	-	chr7	67114462	67119317	D7Ertd715e|NR_015456	0	-
chr7	87679861	87679883	14	1	-	chr7	87599878	87680005	Blm|NM_001042527	0	-
chr7	87679861	87679883	14	1	-	chr7	87599878	87679884	Blm|NM_007550	0	-
chr7	105310564	105310633	5	1	-	chr7	105270074	105326703	Capn5|NM_007602	0	-
chr7	107731509	107731532	7	1	-	chr7	107697630	107731644	Mrpl48|NM_198831	0	-
chr7	107731509	107731532	7	1	-	chr7	107697630	107756510	Mrpl48|NR_003559	0	-
chr7	111506225	111506292	27	2	-	chr7	111503911	111507160	Trim30b|NM_175648	0	-
chr7	111506225	111506292	27	8	-	chr7	111503911	111507160	Trim30b|NM_175648	0	-
chr7	116972638	116972665	11	1	-	chr7	116942204	117009193	Scube2|NM_020052	0	-
chr7	123138544	123138599	16	1	-	chr7	122614857	123138600	Sox6|NM_011445	0	-
chr7	123138544	123138599	16	1	-	chr7	122614857	123174561	Sox6|NM_001025560	0	-
chr7	123138544	123138599	16	1	-	chr7	122614857	123182258	Sox6|NM_001025559	0	-
chr7	125999005	125999030	12	1	-	chr7	125985731	125999127	2310008H09Rik|NM_001168220	0	-
chr7	125999005	125999030	12	1	-	chr7	125985731	125999512	2310008H09Rik|NM_001168219	0	-
chr7	125999005	125999030	12	1	-	chr7	125985731	125999512	2310008H09Rik|NM_001168218	0	-
chr7	125999005	125999030	12	1	-	chr7	125985731	125999512	2310008H09Rik|NM_023197	0	-
chr7	133709699	133709744	9	1	-	chr7	133690424	133709880	Eif3c|NM_146200	0	-
chr7	151864678	151864703	8	1	-	chr7	151774453	151924497	Ano1|NM_178642	0	-
chr7	151864678	151864703	8	1	-	chr7	151774453	151924497	Ano1|NM_001242349	0	-
chr8	4613260	4613287	20	1	+	chr8	4613169	4630231	Zfp958|NM_145591	0	+
chr8	9982949	9982984	20	1	+	chr8	9977716	9992154	Abhd13|NM_026868	0	+
chr8	9982949	9982984	20	1	+	chr8	9977716	9992154	Abhd13|NM_001081119	0	+
chr8	41509307	41509341	9	1	+	chr8	41509168	41570196	Zdhhc2|NM_178395	0	+
chr8	63372646	63372667	14	7	+	chr8	63369247	63386369	2700029M09Rik|NM_028299	0	+
chr8	63472430	63472470	1390	75	+	chr8	63472016	63609031	Nek1|NM_175089	0	+
chr8	75170820	75170844	8	3	+	chr8	75170609	75238645	Nwd1|NM_176940	0	+
chr8	91171302	91171329	21	3	+	chr8	91171245	91212373	Nod2|NM_145857	0	+
chr8	95425334	95425392	28	11	+	chr8	95425293	95426308	Capns2|NM_027112	0	+
chr8	95425334	95425392	28	11	+	chr8	95379248	95443178	Lpcat2|NM_173014	0	+
chr8	15953807	15953907	18	1	-	chr8	15892544	17535385	Csmd1|NM_053171	0	-
chr8	19993996	19994021	6	1	-	chr8	19981359	20020392	2610005L07Rik|NR_028428	0	-
chr8	19993996	19994021	6	1	-	chr8	19991155	20020278	6820431F20Rik|NR_030708	0	-
chr8	23745118	23745147	20	1	-	chr8	23744856	23747281	A930013F10Rik|NR_027886	0	-
chr8	23745118	23745147	20	1	-	chr8	23738590	23763909	Polb|NM_011130	0	-
chr8	25661342	25661378	10	1	-	chr8	25642363	25686805	Ido2|NM_145949	0	-
chr8	37676633	37676664	36	3	-	chr8	37630792	37676997	Dlc1|NM_015802	0	-
chr8	37676633	37676664	36	3	-	chr8	37630792	38001687	Dlc1|NM_001194940	0	-
chr8	37676633	37676664	36	3	-	chr8	37630792	37796108	Dlc1|NM_001194941	0	-
chr8	48374281	48374345	7	1	-	chr8	48265401	48374756	Stox2|NM_001114311	0	-
chr8	48374281	48374345	7	1	-	chr8	48265401	48437702	Stox2|NM_175162	0	-
chr8	73909652	73909697	19	2	-	chr8	73908172	73919700	Ushbp1|NM_181418	0	-
chr8	89996164	89996209	9	1	-	chr8	89992751	89996491	Cbln1|NM_019626	0	-
chr8	98376794	98376821	7	2	-	chr8	98359822	98377391	Slc38a7|NM_172758	0	-
chr8	108514567	108514593	5	1	-	chr8	108508956	108520323	Dpep2|NM_176913	0	-
chr8	109570688	109570716	6	1	-	chr8	109570189	109572514	Pdf|NM_026513	0	-
chr9	3338554	3338603	6	1	+	chr9	3335230	3385846	Alkbh8|NM_026303	0	+
chr9	43877540	43877565	11	1	+	chr9	43877511	43903710	Usp2|NM_016808	0	+
chr9	43877540	43877565	11	1	+	chr9	43875103	43903710	Usp2|NM_198092	0	+
chr9	64808936	64808967	91	7	+	chr9	64808743	64834781	2010321M09Rik|NM_175153	0	+
chr9	64808936	64808967	91	7	+	chr9	64808638	64834781	2010321M09Rik|NM_001077631	0	+
chr9	66198413	66198445	7	1	+	chr9	66198256	66356582	Herc1|NM_145617	0	+
chr9	69245853	69245878	21	4	+	chr9	69245804	69280881	Narg2|NM_145618	0	+
chr9	72149549	72149593	13	1	+	chr9	72122705	72211578	Zfp280d|NM_146224	0	+
chr9	100686950	100686984	55	10	+	chr9	100544041	100858963	Stag1|NM_009282	0	+
chr9	105297953	105297998	7	1	+	chr9	105297721	105308086	Aste1|NM_025651	0	+
chr9	106331908	106331932	13	1	+	chr9	106331869	106333898	Rpl29|NM_009082	0	+
chr9	107481684	107481706	13	2	+	chr9	107479282	107482464	Hyal1|NM_008317	0	+
chr9	120001286	120001318	10	1	+	chr9	120001250	120004024	Ccr8|NM_007720	0	+
chr9	121628615	121628678	33	13	+	chr9	121628298	121665959	Nktr|NM_010918	0	+
chr9	122714796	122714827	23	4	+	chr9	122714664	122745450	D9Ertd402e|NM_001013405	0	+
chr9	20296878	20296934	5	1	-	chr9	20272992	20297190	Zfp426|NM_001110309	0	-
chr9	20296878	20296934	5	1	-	chr9	20272992	20297190	Zfp426|NM_146221	0	-
chr9	44076189	44076231	7	1	-	chr9	44060795	44076270	Nlrx1|NM_001163743	0	-
chr9	44076189	44076231	7	1	-	chr9	44060795	44076574	Nlrx1|NM_178420	0	-
chr9	44076189	44076231	7	1	-	chr9	44060795	44076682	Nlrx1|NM_001163742	0	-
chr9	46119689	46119731	7	1	-	chr9	46111443	46128069	4931429L15Rik|NM_183104	0	-
chr9	56108528	56108571	5	2	-	chr9	56048935	56265857	C230081A13Rik|NM_172924	0	-
chr9	57262895	57262960	8	1	-	chr9	57260470	57287921	Ppcdc|NM_176831	0	-
chr9	57492861	57492891	11	1	-	chr9	57474452	57492987	Csk|NM_007783	0	-
chr9	63141560	63141585	8	1	-	chr9	63011576	63225659	Map2k5|NM_011840	0	-
chr9	71332668	71332715	5	1	-	chr9	71326243	71333790	Grinl1a|NM_178602	0	-
chr9	71332668	71332715	5	1	-	chr9	71326243	71332765	Grinl1a|NM_001164793	0	-
chr9	78161481	78161542	20	2	-	chr9	78159778	78161855	Omt2a|NM_001111286	0	-
chr9	78161481	78161542	20	2	-	chr9	78159778	78162604	Omt2a|NM_001164523	0	-
chr9	87148852	87148893	6	1	-	chr9	87086797	87150367	4922501C03Rik|NM_199316	0	-
chr9	88610547	88610572	8	1	-	chr9	88583442	88614636	Gm2382|NM_001128601	0	-
chr9	98463228	98463255	36	6	-	chr9	98462878	98464030	4930579K19Rik|NR_029444	0	-
chr9	99336923	99336974	20	3	-	chr9	99285838	99337131	Mras|NM_008624	0	-
chr9	106377191	106377219	6	1	-	chr9	106372683	106378982	Parp3|NM_145619	0	-
chr9	107958994	107959042	8	1	-	chr9	107954002	107981706	Rnf123|NM_032543	0	-
chr9	108165893	108165945	6	1	-	chr9	108108288	108166067	Dag1|NM_010017	0	-
chr9	119525900	119525932	10	1	-	chr9	119517573	119628150	Scn10a|NM_001205321	0	-
chr9	119525900	119525932	10	1	-	chr9	119517573	119628150	Scn10a|NM_009134	0	-
chr9	122985642	122985677	7	2	-	chr9	122981427	123022323	Zdhhc3|NM_026917	0	-
chr9	122986071	122986105	20	1	-	chr9	122981427	123022323	Zdhhc3|NM_026917	0	-
chr9	122987062	122987147	12	2	-	chr9	122981427	123022323	Zdhhc3|NM_026917	0	-
chr9	123760683	123760716	18	3	-	chr9	123698627	123760782	Fyco1|NM_148925	0	-
chr9	123760683	123760716	18	3	-	chr9	123698627	123761020	Fyco1|NM_001110253	0	-
chrX	35543067	35543175	25	2	+	chrX	35542969	35550223	Zbtb33|NM_001079513	0	+
chrX	35543067	35543175	25	2	+	chrX	35542969	35550223	Zbtb33|NM_020256	0	+
chrX	36126027	36126052	24	3	+	chrX	36125956	36315865	6030498E09Rik|NM_183126	0	+
chrX	39421032	39421056	14	1	+	chrX	39421012	39462841	Xiap|NM_009688	0	+
chrX	63906344	63906381	6	1	+	chrX	63902492	63914577	Slitrk2|NM_001161431	0	+
chrX	63906344	63906381	6	1	+	chrX	63906333	63914577	Slitrk2|NM_198863	0	+
chrX	137910088	137910120	6	6	+	chrX	137909961	138123778	Col4a5|NM_007736	0	+
chrX	137910088	137910120	6	6	+	chrX	137909961	138123778	Col4a5|NM_001163155	0	+
chrX	34158713	34158733	13	7	-	chrX	34148177	34185409	Akap17b|NM_001081956	0	-
chrX	34704071	34704098	5	1	-	chrX	34690692	34708837	Akap14|NM_001033785	0	-
chrX	100766383	100766476	10	1	-	chrX	100756248	100819093	B230206F22Rik|NR_028381	0	-
chrX	100766383	100766476	10	1	-	chrX	100764843	100819093	B230206F22Rik|NR_028380	0	-
chrX	102238841	102238893	7	1	-	chrX	102236192	102265463	5530601H04Rik|NR_015467	0	-
chrX	102569032	102569066	10	1	-	chrX	102568332	102587093	5330434G04Rik|NR_015552	0	-
chrX	102571047	102571083	7	1	-	chrX	102568332	102587093	5330434G04Rik|NR_015552	0	-
chrX	138786361	138786389	13	1	-	chrX	138752535	138825078	Acsl4|NM_207625	0	-
chrX	138786361	138786389	13	1	-	chrX	138752535	138825078	Acsl4|NM_019477	0	-
chrX	138786361	138786389	13	1	-	chrX	138752535	138825078	Acsl4|NM_001033600	0	-
chrX	143835451	143835487	15	1	-	chrX	143818020	143838375	Il13ra2|NM_008356	0	-
chrX	143946658	143946742	7	1	-	chrX	143906236	143988624	Lrch2|NM_001081173	0	-
chrX	146843298	146843333	20	1	-	chrX	146832315	146875680	Tmem29|NM_001164684	0	-
chrX	146843298	146843333	20	1	-	chrX	146832315	146893693	Tmem29|NM_001164683	0	-
chrX	146843298	146843333	20	1	-	chrX	146843120	146875448	Tmem29|NM_001164686	0	-
chrX	146843641	146843676	6	1	-	chrX	146832315	146875680	Tmem29|NM_001164684	0	-
chrX	146843641	146843676	6	1	-	chrX	146832315	146893693	Tmem29|NM_001164683	0	-
chrX	146843641	146843676	6	1	-	chrX	146843120	146875448	Tmem29|NM_001164686	0	-