chr1	39704786	39704810	26	24	-	chr1	39675250	39708027	Creg2|NM_170597	0	-
chr1	107495702	107495727	7	4	-	chr1	107417716	107560253	Pign|NM_013784	0	-
chr1	137347148	137347171	9	3	-	chr1	137331156	137481932	Nav1|NM_173437	0	-
chr1	138200853	138200883	10	4	-	chr1	138164699	138242681	Camsap1l1|NM_001081360	0	-
chr10	60805101	60805132	105	40	-	chr10	60782404	60846271	X99384|NM_013753	0	-
chr10	62232734	62232757	8	5	-	chr10	62206675	62255116	Ccar1|NM_026201	0	-
chr10	78989352	78989377	13	5	-	chr10	78989173	78996532	Ppap2c|NM_015817	0	-
chr10	79999538	79999560	7	1	-	chr10	79982329	80001869	Atp8b3|NM_026094	0	-
chr10	86384910	86384933	5	4	-	chr10	86303954	86470687	Stab2|NM_138673	0	-
chr10	88193772	88193801	35	9	-	chr10	88192285	88193846	Gm4925|NM_001037166	0	-
chr11	3064672	3064693	5	1	-	chr11	3031852	3093466	Sfi1|NM_030207	0	-
chr11	70484375	70484398	14	4	-	chr11	70482964	70501607	Camta2|NM_178116	0	-
chr11	70484375	70484398	14	4	-	chr11	70482964	70501607	Camta2|NM_001190379	0	-
chr11	70484375	70484398	14	4	-	chr11	70482964	70501607	Camta2|NM_001190378	0	-
chr11	70484375	70484398	14	4	-	chr11	70482964	70501607	Camta2|NM_001190376	0	-
chr11	74525083	74525103	5	3	-	chr11	74487450	74537886	Pafah1b1|NM_013625	0	-
chr11	74525083	74525103	5	3	-	chr11	74487450	74537360	Pafah1b1|NR_037610	0	-
chr11	79950323	79950346	13	2	-	chr11	79950179	79955655	1110002N22Rik|NM_183275	0	-
chr11	86397592	86397615	9	1	-	chr11	86397568	86397660	Mir21|NR_029738	0	-
chr11	86397592	86397615	9	1	-	chr11	86397366	86497324	Vmp1|NM_029478	0	-
chr11	97021126	97021153	7	3	-	chr11	97021023	97049206	Kpnb1|NM_008379	0	-
chr11	99143943	99143964	6	1	-	chr11	99141406	99146552	Krt24|NM_029393	0	-
chr11	114817599	114817623	27	10	-	chr11	114817591	114821731	Cd300c|NM_199225	0	-
chr11	120459412	120459445	206	25	-	chr11	120455829	120459679	Thoc4|NM_011568	0	-
chr12	36188763	36188786	11	1	-	chr12	36182650	36219661	Ahr|NM_013464	0	-
chr12	76220952	76220976	7	6	-	chr12	75998203	76278319	Kcnh5|NM_172805	0	-
chr13	8972136	8972160	14	1	-	chr13	8971723	8995258	Gtpbp4|NM_027000	0	-
chr13	21520246	21520271	11	2	-	chr13	21513143	21532922	Pgbd1|NM_001162920	0	-
chr13	21520246	21520271	11	2	-	chr13	21513143	21532579	Pgbd1|NM_001162919	0	-
chr13	21520246	21520271	11	2	-	chr13	21513143	21532922	Pgbd1|NM_001012311	0	-
chr13	112559629	112559654	5	2	-	chr13	112536642	112599191	Map3k1|NM_011945	0	-
chr14	24118735	24118759	8	3	-	chr14	24117982	24823427	Kcnma1|NM_010610	0	-
chr14	32894134	32894158	15	1	-	chr14	32893747	32898851	Dph3|NM_001047433	0	-
chr14	32894134	32894158	15	1	-	chr14	32893747	32898851	Dph3|NM_172254	0	-
chr14	61840102	61840126	12	1	-	chr14	61837951	61877327	Sgcg|NM_011892	0	-
chr14	67657799	67657826	155	43	-	chr14	67632892	67691308	Ppp2r2a|NM_001205188	0	-
chr14	67657799	67657826	155	43	-	chr14	67632892	67691308	Ppp2r2a|NM_028032	0	-
chr14	69257603	69257626	19	8	-	chr14	69225790	69273899	Adam28|NM_183366	0	-
chr14	69257603	69257626	19	8	-	chr14	69224083	69273899	Adam28|NM_001048175	0	-
chr14	69257603	69257626	19	8	-	chr14	69224935	69273899	Adam28|NM_010082	0	-
chr15	8274290	8274312	5	4	-	chr15	8241986	8394463	Nipbl|NM_201232	0	-
chr15	8274290	8274312	5	4	-	chr15	8241224	8394463	Nipbl|NM_027707	0	-
chr15	9654911	9654934	5	2	-	chr15	9592490	9678561	Spef2|NM_177123	0	-
chr15	44503758	44503782	9	1	-	chr15	44503402	44584004	Sybu|NM_178765	0	-
chr15	44503758	44503782	9	1	-	chr15	44503402	44619609	Sybu|NM_176998	0	-
chr15	44503758	44503782	9	1	-	chr15	44503402	44619609	Sybu|NM_001032727	0	-
chr15	47412340	47412372	93	9	-	chr15	47412183	48623535	Csmd3|NM_001081391	0	-
chr15	78122984	78123007	7	1	-	chr15	78112939	78136033	Csf2rb2|NM_007781	0	-
chr15	79659029	79659054	17	3	-	chr15	79654327	79664763	Cbx6|NM_028763	0	-
chr15	79659029	79659054	17	3	-	chr15	79616780	79664763	Npcd|NM_001013362	0	-
chr15	79659029	79659054	17	3	-	chr15	79616780	79664763	Npcd|NM_001013360	0	-
chr15	102381959	102381983	8	3	-	chr15	102367074	102455852	Atf7|NM_146065	0	-
chr16	32836539	32836564	7	1	-	chr16	32821787	32868452	1700021K19Rik|NM_172615	0	-
chr16	32836539	32836564	7	1	-	chr16	32821787	32868452	1700021K19Rik|NM_001200038	0	-
chr16	38321514	38321541	57	3	-	chr16	38297839	38341946	4932425I24Rik|NM_001081025	0	-
chr16	44739057	44739080	6	1	-	chr16	44738991	44746476	Gtpbp8|NM_001159329	0	-
chr16	44739057	44739080	6	1	-	chr16	44738991	44746476	Gtpbp8|NM_025332	0	-
chr16	89508354	89508379	10	1	-	chr16	89507947	89508568	Krtap7-1|NM_027771	0	-
chr16	90721944	90721966	11	2	-	chr16	90719556	90727616	2610039C10Rik|NM_025642	0	-
chr17	33019474	33019498	10	3	-	chr17	33016165	33028548	Zfp870|NM_207245	0	-
chr17	47071027	47071051	11	1	-	chr17	47065239	47147481	Ubr2|NM_146078	0	-
chr17	47071027	47071051	11	1	-	chr17	47065239	47147481	Ubr2|NM_001177374	0	-
chr17	79211885	79211909	6	1	-	chr17	79152245	79234721	Heatr5b|NM_001081179	0	-
chr17	81807607	81807636	43	12	-	chr17	81772444	82137717	Slc8a1|NM_011406	0	-
chr17	81807607	81807636	43	12	-	chr17	81772444	82137717	Slc8a1|NM_001112798	0	-
chr18	6241287	6241320	13	2	-	chr18	6201002	6241522	Kif5b|NM_008448	0	-
chr18	25837418	25837441	7	1	-	chr18	25836380	25912484	Celf4|NM_001146295	0	-
chr18	25837418	25837441	7	1	-	chr18	25636120	25912484	Celf4|NM_001174074	0	-
chr18	25837418	25837441	7	1	-	chr18	25636120	25912484	Celf4|NM_001146293	0	-
chr18	25837418	25837441	7	1	-	chr18	25636120	25912484	Celf4|NM_001146292	0	-
chr18	25837418	25837441	7	1	-	chr18	25636120	25912484	Celf4|NM_133195	0	-
chr18	25837418	25837441	7	1	-	chr18	25636120	25912484	Celf4|NM_001146294	0	-
chr18	47406305	47406330	5	4	-	chr18	47404907	47528522	Sema6a|NM_018744	0	-
chr18	49915126	49915147	5	2	-	chr18	49855798	49915255	Dtwd2|NM_026854	0	-
chr18	49915126	49915147	5	2	-	chr18	49855798	49915255	Dtwd2|NM_001170960	0	-
chr18	84377519	84377542	6	1	-	chr18	84377093	84758896	Zfp407|NM_001033341	0	-
chr19	17748340	17748369	36	23	-	chr19	17632648	17912122	Pcsk5|NM_001163144	0	-
chr19	17748340	17748369	36	23	-	chr19	17507321	17912122	Pcsk5|NM_001190483	0	-
chr19	19052229	19052252	61	37	-	chr19	19005098	19075607	Rorb|NM_146095	0	-
chr19	19052229	19052252	61	37	-	chr19	19005098	19185686	Rorb|NM_001043354	0	-
chr19	29685909	29685932	14	12	-	chr19	29684372	29722910	Ermp1|NM_001081213	0	-
chr19	32750915	32750938	6	1	-	chr19	32747052	32786788	Atad1|NM_026487	0	-
chr19	57109620	57109643	31	2	-	chr19	57107753	57271982	Ablim1|NM_001103177	0	-
chr19	57109620	57109643	31	2	-	chr19	57107753	57193499	Ablim1|NM_001103178	0	-
chr19	57109620	57109643	31	2	-	chr19	57107753	57290522	Ablim1|NM_178688	0	-
chr2	6020606	6020632	30	3	-	chr2	6019545	6051231	5430407P10Rik|NM_001159657	0	-
chr2	6020606	6020632	30	3	-	chr2	6019545	6051231	5430407P10Rik|NM_144883	0	-
chr2	17312628	17312652	19	1	-	chr2	17268360	17652695	Nebl|NM_028757	0	-
chr2	38929674	38929699	52	15	-	chr2	38921734	39046250	Scai|NM_178778	0	-
chr2	84172326	84172350	18	1	-	chr2	84170782	84265423	Calcrl|NM_018782	0	-
chr2	104598391	104598413	5	2	-	chr2	104594953	104656853	Qser1|NM_001123327	0	-
chr2	155233878	155233901	6	1	-	chr2	155216391	155266519	Ncoa6|NM_019825	0	-
chr2	155233878	155233901	6	1	-	chr2	155216391	155266519	Ncoa6|NM_001242558	0	-
chr3	7954860	7954883	38	2	-	chr3	7925302	7954887	1700010I02Rik|NR_040587	0	-
chr3	59122997	59123025	20	2	-	chr3	59120656	59148178	Igsf10|NM_001162884	0	-
chr3	80489423	80489446	67	27	-	chr3	80488857	80606713	Gria2|NM_013540	0	-
chr3	80489423	80489446	67	27	-	chr3	80488857	80606713	Gria2|NM_001083806	0	-
chr3	89083497	89083521	63	5	-	chr3	89075651	89084873	Efna1|NM_001162425	0	-
chr3	89083497	89083521	63	5	-	chr3	89075651	89083567	Efna1|NM_010107	0	-
chr3	95072166	95072184	7	2	-	chr3	95057595	95085998	Prune|NM_173347	0	-
chr3	95142809	95142829	8	1	-	chr3	95127446	95161124	Setdb1|NM_001163642	0	-
chr3	95142809	95142829	8	1	-	chr3	95127446	95161124	Setdb1|NM_001163641	0	-
chr3	95142809	95142829	8	1	-	chr3	95127446	95161124	Setdb1|NM_018877	0	-
chr3	108597538	108597562	6	1	-	chr3	108596097	108643420	Stxbp3a|NM_011504	0	-
chr3	115642751	115642780	11	5	-	chr3	115641890	115710324	Slc30a7|NM_023214	0	-
chr3	144672113	144672137	8	2	-	chr3	144667500	144695740	Clca3|NM_017474	0	-
chr4	42539475	42539499	9	4	-	chr4	42535970	42541769	Gm13298|NM_001085530	0	-
chr4	43505799	43505826	7	1	-	chr4	43505656	43505931	Rmrp|NR_001460	0	-
chr4	43505885	43505931	39	3	-	chr4	43505656	43505931	Rmrp|NR_001460	0	-
chr4	106810502	106810525	13	2	-	chr4	106806766	106850971	2210012G02Rik|NM_025617	0	-
chr4	117809627	117809650	5	3	-	chr4	117809608	117852648	Kdm4a|NM_001161823	0	-
chr4	118115274	118115296	5	1	-	chr4	118115021	118130100	Mpl|NM_001122949	0	-
chr4	118115274	118115296	5	1	-	chr4	118115021	118130100	Mpl|NM_010823	0	-
chr4	141472400	141472424	8	3	-	chr4	141446765	141567552	Fhad1|NM_177868	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NR_027864	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NM_145556	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NM_001008546	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NM_001008545	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NM_001003899	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NM_001003898	0	-
chr5	9511627	9511650	10	1	-	chr5	9485235	9725352	Grm3|NM_181850	0	-
chr5	23051309	23051334	6	5	-	chr5	23009173	23122389	Srpk2|NM_009274	0	-
chr5	33132393	33132420	26	2	-	chr5	33131855	33196879	C330019G07Rik|NM_194340	0	-
chr5	71143002	71143031	47	4	-	chr5	71142285	71233856	Gabrg1|NM_010252	0	-
chr5	93611081	93611104	8	2	-	chr5	93610958	93635521	Ccni|NM_017367	0	-
chr5	115785493	115785518	12	1	-	chr5	115783250	115791170	Gatc|NM_029645	0	-
chr5	121059543	121059568	54	3	-	chr5	121059068	121062598	1110008J03Rik|NM_029096	0	-
chr5	121059543	121059568	54	3	-	chr5	121059068	121062598	1110008J03Rik|NM_133908	0	-
chr5	123330589	123330614	33	4	-	chr5	123320684	123350359	Kdm2b|NM_013910	0	-
chr5	123330589	123330614	33	4	-	chr5	123320684	123438542	Kdm2b|NM_001005866	0	-
chr5	123330589	123330614	33	4	-	chr5	123320684	123439101	Kdm2b|NM_001003953	0	-
chr6	3671954	3671979	23	8	-	chr6	3671896	3672003	Mir489|NR_030250	0	-
chr6	3671954	3671979	23	8	-	chr6	3635719	3714713	Calcr|NM_007588	0	-
chr6	3671954	3671979	23	8	-	chr6	3635719	3713623	Calcr|NM_001042725	0	-
chr6	5171021	5171043	10	4	-	chr6	5170851	5206233	Pon3|NM_173006	0	-
chr6	91314417	91314441	10	1	-	chr6	91313976	91361363	Wnt7a|NM_009527	0	-
chr6	102137093	102137117	17	1	-	chr6	102113299	102414661	Cntn3|NM_008779	0	-
chr6	119307871	119307896	44	5	-	chr6	119303167	119367501	Adipor2|NM_197985	0	-
chr6	137475664	137475686	6	2	-	chr6	137425765	137597641	Eps8|NM_007945	0	-
chr7	10423434	10423458	8	1	-	chr7	10402130	10426674	Vmn2r47|NM_001105151	0	-
chr7	28110175	28110198	5	1	-	chr7	28090159	28118667	Ltbp4|NM_001113549	0	-
chr7	28110175	28110198	5	1	-	chr7	28090159	28122631	Ltbp4|NM_175641	0	-
chr7	54164409	54164434	20	2	-	chr7	54144396	54175300	Tsg101|NM_021884	0	-
chr7	86604114	86604133	7	2	-	chr7	86594268	86611159	Polg|NM_017462	0	-
chr7	93454680	93454704	8	5	-	chr7	93454694	93455621	Olfr309|NM_001011866	0	-
chr7	106331078	106331103	26	3	-	chr7	106302172	106331223	Dgat2|NM_026384	0	-
chr8	4210819	4210842	11	1	-	chr8	4209542	4217312	BC068157|NM_207203	0	-
chr8	13259001	13259025	13	8	-	chr8	13255962	13288126	Dcun1d2|NM_001042651	0	-
chr8	13259001	13259025	13	8	-	chr8	13255962	13288126	Dcun1d2|NM_001042649	0	-
chr8	13259001	13259025	13	8	-	chr8	13255962	13288126	Dcun1d2|NM_001042650	0	-
chr8	13259001	13259025	13	8	-	chr8	13255962	13288126	Dcun1d2|NM_001024504	0	-
chr8	75622731	75622755	27	18	-	chr8	75338497	75876455	Large|NM_010687	0	-
chr8	126365110	126365134	10	2	-	chr8	126364743	126384109	1700054N08Rik|NM_028536	0	-
chr9	21564569	21564595	109	20	-	chr9	21559885	21564730	Spc24|NM_026282	0	-
chr9	39763057	39763080	8	1	-	chr9	39761841	39764654	Olfr976|NM_146367	0	-
chr9	51952359	51952383	15	3	-	chr9	51920089	51976216	Zc3h12c|NM_001162921	0	-
chr9	57289233	57289258	9	9	-	chr9	57289133	57315831	Scamp5|NM_020270	0	-
chr9	61775030	61775055	12	1	-	chr9	61765084	61794606	Kif23|NM_024245	0	-
chr9	71352405	71352429	7	1	-	chr9	71352153	71440167	Gcom1|NM_001033208	0	-
chr9	107661225	107661252	213	22	-	chr9	107642825	107673333	Rbm5|NM_148930	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117161601	Rbms3|NM_178660	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117161601	Rbms3|NM_001172122	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117161601	Rbms3|NM_001172126	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117161601	Rbms3|NM_001172124	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117161601	Rbms3|NM_001172123	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117539031	Rbms3|NM_001172121	0	-
chrX	35774109	35774133	24	9	-	chrX	35772685	35809632	Lamp2|NM_010685	0	-
chrX	35774109	35774133	24	9	-	chrX	35758240	35809632	Lamp2|NM_001017959	0	-
chrX	69516143	69516166	9	2	-	chrX	69502770	69520060	Gabre|NM_017369	0	-
chrX	99266045	99266070	8	1	-	chrX	99261880	99266646	Rgag4|NM_183318	0	-
chrX	99266045	99266070	8	1	-	chrX	99261880	99266646	Rgag4|NR_028404	0	-
chrX	101274475	101274503	190	90	-	chrX	101272774	101396456	C77370|NM_001077354	0	-
chrX	109760389	109760412	11	5	-	chrX	109752035	109812260	Pof1b|NM_181579	0	-
chrX	133297280	133297304	8	1	-	chrX	133292212	133314260	Glra4|NM_010297	0	-
chrY	606186	606208	5	1	-	chrY	597157	623056	Ddx3y|NM_012008	0	-
chr1	31280698	31280725	112	9	+	chr1	31279683	31281132	4930521A18Rik|NM_029062	0	+
chr1	57031982	57032007	12	10	+	chr1	57028312	57032040	9130024F11Rik|NR_024325	0	+
chr1	57031982	57032007	12	10	+	chr1	57028312	57032040	9130024F11Rik|NR_024326	0	+
chr1	74379216	74379239	15	30	+	chr1	74379183	74400266	Pnkd|NM_019999	0	+
chr1	74379216	74379239	15	30	+	chr1	74331607	74400266	Pnkd|NM_001039509	0	+
chr1	159395902	159395930	29	26	+	chr1	159388712	159418864	BC026585|NM_001033284	0	+
chr1	163435189	163435213	14	6	+	chr1	163424787	163435421	Tnfsf18|NM_183391	0	+
chr1	193583902	193583925	5	1	+	chr1	193541902	193608134	Lpgat1|NM_172266	0	+
chr1	193583902	193583925	5	1	+	chr1	193542273	193608134	Lpgat1|NM_001134829	0	+
chr10	4541195	4541219	12	3	+	chr10	4541075	4547383	Fbxo5|NM_025995	0	+
chr10	10325905	10325930	6	6	+	chr10	10325742	10336111	Gm5177|NR_033630	0	+
chr11	21216796	21216821	19	4	+	chr11	21138891	21221136	Vps54|NM_139061	0	+
chr11	23631786	23631813	19	7	+	chr11	23565673	23632876	Pus10|NM_028956	0	+
chr11	23631786	23631813	19	7	+	chr11	23565975	23632876	Pus10|NM_028304	0	+
chr11	23631786	23631813	19	7	+	chr11	23565673	23632876	Pus10|NM_001033654	0	+
chr11	62129383	62129408	19	1	+	chr11	62094974	62129943	Ttc19|NM_029704	0	+
chr11	62129383	62129408	19	1	+	chr11	62094974	62129926	Ttc19|NM_028360	0	+
chr11	70464910	70464935	7	1	+	chr11	70461090	70464916	Rnf167|NM_027445	0	+
chr11	75383475	75383499	6	10	+	chr11	75345195	75391074	Slc43a2|NM_001199284	0	+
chr11	75383475	75383499	6	10	+	chr11	75345613	75391074	Slc43a2|NM_001199283	0	+
chr11	75383475	75383499	6	10	+	chr11	75345195	75391074	Slc43a2|NM_173388	0	+
chr11	75401598	75401622	39	2	+	chr11	75401609	75442280	Pitpna|NM_008850	0	+
chr11	87866138	87866162	6	1	+	chr11	87861172	87867259	Srsf1|NM_173374	0	+
chr11	87866138	87866162	6	1	+	chr11	87861172	87867259	Srsf1|NM_001078167	0	+
chr11	95243037	95243062	11	1	+	chr11	95198331	95243186	Fam117a|NM_172543	0	+
chr11	98072057	98072081	7	5	+	chr11	98064618	98108018	Cdk12|NM_026952	0	+
chr11	98072057	98072081	7	5	+	chr11	98064618	98114854	Cdk12|NM_001109626	0	+
chr11	98072057	98072081	7	5	+	chr11	98064618	98114854	Cdk12|NM_001109628	0	+
chr11	102543115	102543141	22	3	+	chr11	102526901	102543551	Gm1564|NM_001127576	0	+
chr11	108298616	108298639	12	7	+	chr11	108286579	108721929	Ccdc46|NM_029606	0	+
chr11	113550469	113550483	5	1	+	chr11	113545725	113555961	D11Wsu47e|NM_177777	0	+
chr12	85002742	85002768	67	4	+	chr12	84973183	85024073	Rbm25|NM_027349	0	+
chr12	105647119	105647143	11	3	+	chr12	105644917	105652539	Serpina3n|NM_009252	0	+
chr12	107051489	107051513	9	2	+	chr12	107022911	107077153	Papola|NM_011112	0	+
chr13	55419167	55419190	6	1	+	chr13	55311142	55419686	Nsd1|NM_008739	0	+
chr14	14936803	14936827	7	1	+	chr14	14845004	14939815	Atxn7|NM_139227	0	+
chr14	31688704	31688727	9	3	+	chr14	31638779	31690396	Tmem110|NM_028839	0	+
chr14	33752426	33752450	26	8	+	chr14	33669941	33752675	E130203B14Rik|NM_178791	0	+
chr14	58423111	58423137	32	2	+	chr14	58417025	58423817	Sap18|NM_009119	0	+
chr14	63544252	63544276	11	1	+	chr14	63456526	63575723	Wdfy2|NM_175546	0	+
chr14	64284110	64284134	35	4	+	chr14	64225366	64439247	Xkr6|NM_173393	0	+
chr14	65207593	65207618	30	3	+	chr14	65206951	65212798	A930011O12Rik|NR_040709	0	+
chr14	75040871	75040895	6	3	+	chr14	75040646	75106666	Htr2a|NM_172812	0	+
chr15	38868912	38868936	38	4	+	chr15	38837825	38869736	Fzd6|NM_001162494	0	+
chr15	38868912	38868936	38	4	+	chr15	38837878	38869736	Fzd6|NM_008056	0	+
chr15	78171161	78171184	7	1	+	chr15	78156419	78181431	Csf2rb|NM_007780	0	+
chr16	15649041	15649064	23	17	+	chr16	15637958	15842332	Prkdc|NM_011159	0	+
chr16	91394117	91394138	10	2	+	chr16	91373027	91394288	Ifnar2|NM_001110498	0	+
chr16	91394117	91394138	10	2	+	chr16	91373027	91405832	Ifnar2|NM_010509	0	+
chr17	27234948	27234971	7	1	+	chr17	27194248	27259168	Itpr3|NM_080553	0	+
chr17	30955135	30955159	14	3	+	chr17	30763880	31012209	Dnahc8|NM_013811	0	+
chr17	31741768	31741801	1132	89	+	chr17	31701717	31744638	Pknox1|NR_027493	0	+
chr17	31741768	31741801	1132	89	+	chr17	31701717	31744638	Pknox1|NM_016670	0	+
chr17	85393746	85393769	9	9	+	chr17	85356080	85423332	Ppm1b|NM_001159497	0	+
chr17	85393746	85393769	9	9	+	chr17	85357340	85414116	Ppm1b|NM_001159496	0	+
chr17	85393746	85393769	9	9	+	chr17	85357340	85416468	Ppm1b|NM_011151	0	+
chr17	85393746	85393769	9	9	+	chr17	85373391	85423332	Ppm1b|NM_001159498	0	+
chr18	10751968	10751991	13	2	+	chr18	10725622	10812215	Mib1|NM_144860	0	+
chr18	24051888	24051913	321	50	+	chr18	23962470	24052362	Mapre2|NM_153058	0	+
chr18	24051888	24051913	321	50	+	chr18	23910833	24052362	Mapre2|NM_001162942	0	+
chr18	24051888	24051913	321	50	+	chr18	23912225	24052362	Mapre2|NM_001162941	0	+
chr18	36961519	36961553	8	5	+	chr18	36961416	36961761	Vaultrc5|NR_027885	0	+
chr18	61128689	61128713	18	6	+	chr18	61123207	61147806	Camk2a|NM_009792	0	+
chr18	61128689	61128713	18	6	+	chr18	61085285	61147806	Camk2a|NM_177407	0	+
chr19	17192589	17192613	11	4	+	chr19	17030607	17298422	Prune2|NM_181348	0	+
chr19	36940426	36940451	26	3	+	chr19	36908721	36967967	Tnks2|NM_001163635	0	+
chr19	40086672	40086690	5	1	+	chr19	40066913	40086733	Cyp2c37|NM_010001	0	+
chr2	14998313	14998337	15	1	+	chr2	14976988	15000818	Arl5b|NM_029466	0	+
chr2	29002899	29002923	16	1	+	chr2	28980511	29037991	Setx|NM_198033	0	+
chr2	78140445	78140471	19	2	+	chr2	78077703	78142387	Gm14461|NM_177843	0	+
chr2	101538561	101538585	13	6	+	chr2	101518596	101541131	Traf6|NM_009424	0	+
chr2	118614576	118614599	6	2	+	chr2	118605454	118620911	Disp2|NM_170593	0	+
chr2	119576221	119576244	8	1	+	chr2	119568072	119576989	Itpka|NM_146125	0	+
chr2	135078894	135078918	7	2	+	chr2	134611899	135300994	Plcb1|NM_019677	0	+
chr2	135078894	135078918	7	2	+	chr2	134611899	135300994	Plcb1|NM_001145830	0	+
chr2	156373325	156373350	283	50	+	chr2	156373311	156394708	0610011L14Rik|NM_026661	0	+
chr2	156373325	156373350	283	50	+	chr2	156373311	156394708	0610011L14Rik|NM_001164818	0	+
chr2	165343152	165343175	8	6	+	chr2	165329477	165345411	Slc2a10|NM_130451	0	+
chr2	181562274	181562294	5	1	+	chr2	181498036	181562480	Myt1|NM_001171615	0	+
chr2	181562274	181562294	5	1	+	chr2	181501733	181562480	Myt1|NM_008665	0	+
chr2	181562274	181562294	5	1	+	chr2	181531011	181562480	Myt1|NM_001171680	0	+
chr2	181562274	181562294	5	1	+	chr2	181501733	181562480	Myt1|NM_001171616	0	+
chr3	28545583	28545606	10	2	+	chr3	28162135	28569507	Tnik|NM_001163007	0	+
chr3	28545583	28545606	10	2	+	chr3	28162135	28569507	Tnik|NM_026910	0	+
chr3	28545583	28545606	10	2	+	chr3	28162135	28569507	Tnik|NM_001163008	0	+
chr3	28545583	28545606	10	2	+	chr3	28162135	28565371	Tnik|NM_001163009	0	+
chr3	55587562	55587585	9	5	+	chr3	55586431	55589209	Mab21l1|NM_010750	0	+
chr3	60812809	60812836	15	4	+	chr3	60806716	60812901	P2ry1|NM_008772	0	+
chr3	63893957	63893984	13	4	+	chr3	63885563	63909380	Vmn2r1|NM_019918	0	+
chr3	65025968	65025997	32	3	+	chr3	64913564	65182141	Kcnab1|NM_010597	0	+
chr4	11506898	11506922	28	4	+	chr4	11486118	11542954	Rad54b|NM_001039556	0	+
chr4	28893808	28893833	12	1	+	chr4	28740294	28894649	Epha7|NM_010141	0	+
chr4	33411835	33411862	33	4	+	chr4	33397285	33589585	Rngtt|NM_011884	0	+
chr4	41839053	41839077	9	4	+	chr4	41836783	41842582	Gm13298|NM_001085530	0	+
chr4	41839053	41839077	9	4	+	chr4	41763293	42104673	Gm3893|NR_033506	0	+
chr4	43460080	43460104	34	8	+	chr4	43455148	43460947	Tesk1|NM_011571	0	+
chr4	44315323	44315346	9	1	+	chr4	44313788	44377547	Melk|NM_010790	0	+
chr4	45383253	45383282	19	1	+	chr4	45354972	45392594	Dcaf10|NM_153167	0	+
chr4	59234232	59234256	7	4	+	chr4	59202421	59235705	Ugcg|NM_011673	0	+
chr4	106081992	106082019	36	8	+	chr4	105988817	106113932	Usp24|NM_183225	0	+
chr4	115449900	115449926	123	48	+	chr4	115410677	115449932	4732418C07Rik|NM_172698	0	+
chr4	130328601	130328626	9	8	+	chr4	130219273	130337479	Pum1|NM_030722	0	+
chr4	130328601	130328626	9	8	+	chr4	130219273	130337479	Pum1|NM_001159606	0	+
chr4	130328601	130328626	9	8	+	chr4	130219273	130337479	Pum1|NM_001159605	0	+
chr4	130328601	130328626	9	8	+	chr4	130219273	130337479	Pum1|NM_001159604	0	+
chr4	130328601	130328626	9	8	+	chr4	130219273	130337479	Pum1|NM_001159603	0	+
chr4	153394891	153394914	7	3	+	chr4	153385911	153395621	Lrrc47|NM_201226	0	+
chr5	12587939	12587966	33	2	+	chr5	12383165	12588943	Sema3d|NM_028882	0	+
chr5	33285909	33285933	8	1	+	chr5	33206369	33336882	Depdc5|NM_001170567	0	+
chr5	33285909	33285933	8	1	+	chr5	33206369	33298949	Depdc5|NM_177786	0	+
chr5	33285909	33285933	8	1	+	chr5	33206369	33336882	Depdc5|NM_001025426	0	+
chr5	76967476	76967502	17	2	+	chr5	76958347	76999310	Exoc1|NM_027270	0	+
chr5	88893524	88893547	7	1	+	chr5	88885035	88897554	Ambn|NM_009664	0	+
chr5	121944313	121944337	10	9	+	chr5	121902717	121945430	Tmem116|NM_029912	0	+
chr5	121944313	121944337	10	9	+	chr5	121913189	121945430	Tmem116|NM_001161626	0	+
chr5	121944313	121944337	10	9	+	chr5	121913189	121945430	Tmem116|NM_001161627	0	+
chr5	124244184	124244210	9	1	+	chr5	124199734	124271602	Kntc1|NM_001042421	0	+
chr5	124419045	124419069	9	1	+	chr5	124380697	124419904	Ccdc62|NM_001134767	0	+
chr5	139297531	139297546	5	1	+	chr5	139296033	139297573	Gm5294|NM_001195128	0	+
chr5	151603278	151603301	9	1	+	chr5	151476401	151613245	Pds5b|NM_175310	0	+
chr6	4574404	4574432	19	5	+	chr6	4551065	4593381	Casd1|NM_145398	0	+
chr6	17786013	17786035	5	2	+	chr6	17699215	17893022	St7|NM_022332	0	+
chr6	17786013	17786035	5	2	+	chr6	17699215	17893022	St7|NM_001083315	0	+
chr6	38458565	38458589	9	1	+	chr6	38383924	38462763	Ubn2|NM_177185	0	+
chr6	113359760	113359785	491	26	+	chr6	113342490	113364565	Ttll3|NM_133923	0	+
chr6	121211435	121211458	6	4	+	chr6	121195923	121220935	Usp18|NM_011909	0	+
chr6	143136286	143136309	12	1	+	chr6	143115749	143157066	Etnk1|NM_029250	0	+
chr7	3322640	3322663	7	2	+	chr7	3303657	3331005	Prkcc|NM_011102	0	+
chr7	16485041	16485065	22	13	+	chr7	16481472	16489379	Crxos1|NM_001033638	0	+
chr7	16485041	16485065	22	13	+	chr7	16467965	16485648	Crxos1|NR_038092	0	+
chr7	16485041	16485065	22	13	+	chr7	16481472	16485648	Crxos1|NM_001205274	0	+
chr7	19543830	19543855	15	2	+	chr7	19511236	19550668	Nova2|NM_001029877	0	+
chr7	48154733	48154757	12	1	+	chr7	48154647	48185338	Vstm2b|NM_021387	0	+
chr7	52831345	52831368	28	2	+	chr7	52825522	52845080	Bcat2|NM_009737	0	+
chr7	52831345	52831368	28	2	+	chr7	52826648	52845080	Bcat2|NM_001243052	0	+
chr7	52831345	52831368	28	2	+	chr7	52828239	52845080	Bcat2|NM_001243053	0	+
chr7	119231380	119231404	7	4	+	chr7	119167019	119254900	Usp47|NM_177249	0	+
chr7	119231380	119231404	7	4	+	chr7	119167019	119254900	Usp47|NM_133758	0	+
chr7	120445073	120445096	6	2	+	chr7	120350978	120457640	Arntl|NM_001243048	0	+
chr7	120445073	120445096	6	2	+	chr7	120350978	120457640	Arntl|NM_007489	0	+
chr8	15032112	15032136	131	26	+	chr8	15011024	15033332	Kbtbd11|NM_029116	0	+
chr8	70818288	70818312	12	1	+	chr8	70800426	70871603	Sh2d4a|NM_028182	0	+
chr8	82179540	82179566	49	17	+	chr8	82163574	82201654	Otud4|NM_001081164	0	+
chr8	116976928	116976953	6	1	+	chr8	116963551	117876612	Wwox|NM_019573	0	+
chr9	43130255	43130277	7	2	+	chr9	43118845	43144208	Trim29|NM_023655	0	+
chr9	51895920	51895944	22	20	+	chr9	51855254	51896843	Rdx|NM_001104616	0	+
chr9	51895920	51895944	22	20	+	chr9	51856045	51896843	Rdx|NM_009041	0	+
chr9	74879954	74879979	35	2	+	chr9	74800859	74880275	BC031353|NM_001113283	0	+
chr9	74879954	74879979	35	2	+	chr9	74823917	74880275	BC031353|NM_153584	0	+
chr9	102446854	102446878	17	2	+	chr9	102408467	102448569	Ky|NM_024291	0	+
chr9	118951906	118951929	5	2	+	chr9	118835653	118953237	Ctdspl|NM_133710	0	+
chrX	7401723	7401747	21	2	+	chrX	7400968	7413629	Kcnd1|NM_008423	0	+
chrX	33599619	33599649	38	4	+	chrX	33428826	33616557	Dock11|NM_001009947	0	+
chrX	126996054	126996076	5	1	+	chrX	126284277	127000369	Diap2|NM_172493	0	+
chrX	136640831	136640859	233	95	+	chrX	136597417	136641336	E230019M04Rik|NM_177921	0	+