chr10	62232734	62232757	8	5	-	chr10	62206675	62255116	Ccar1|NM_026201	0	-
chr10	78989352	78989377	13	5	-	chr10	78989173	78996532	Ppap2c|NM_015817	0	-
chr11	79950323	79950346	13	2	-	chr11	79950179	79955655	1110002N22Rik|NM_183275	0	-
chr11	86397592	86397615	9	1	-	chr11	86397568	86397660	Mir21|NR_029738	0	-
chr11	86397592	86397615	9	1	-	chr11	86397366	86497324	Vmp1|NM_029478	0	-
chr11	97021126	97021153	7	3	-	chr11	97021023	97049206	Kpnb1|NM_008379	0	-
chr13	8972136	8972160	14	1	-	chr13	8971723	8995258	Gtpbp4|NM_027000	0	-
chr14	24118735	24118759	8	3	-	chr14	24117982	24823427	Kcnma1|NM_010610	0	-
chr14	32894134	32894158	15	1	-	chr14	32893747	32898851	Dph3|NM_001047433	0	-
chr14	32894134	32894158	15	1	-	chr14	32893747	32898851	Dph3|NM_172254	0	-
chr14	61840102	61840126	12	1	-	chr14	61837951	61877327	Sgcg|NM_011892	0	-
chr14	69257603	69257626	19	8	-	chr14	69225790	69273899	Adam28|NM_183366	0	-
chr14	69257603	69257626	19	8	-	chr14	69224083	69273899	Adam28|NM_001048175	0	-
chr14	69257603	69257626	19	8	-	chr14	69224935	69273899	Adam28|NM_010082	0	-
chr15	44503758	44503782	9	1	-	chr15	44503402	44584004	Sybu|NM_178765	0	-
chr15	44503758	44503782	9	1	-	chr15	44503402	44619609	Sybu|NM_176998	0	-
chr15	44503758	44503782	9	1	-	chr15	44503402	44619609	Sybu|NM_001032727	0	-
chr15	47412340	47412372	93	9	-	chr15	47412183	48623535	Csmd3|NM_001081391	0	-
chr16	44739057	44739080	6	1	-	chr16	44738991	44746476	Gtpbp8|NM_001159329	0	-
chr16	44739057	44739080	6	1	-	chr16	44738991	44746476	Gtpbp8|NM_025332	0	-
chr17	33019474	33019498	10	3	-	chr17	33016165	33028548	Zfp870|NM_207245	0	-
chr17	79211885	79211909	6	1	-	chr17	79152245	79234721	Heatr5b|NM_001081179	0	-
chr18	25837418	25837441	7	1	-	chr18	25836380	25912484	Celf4|NM_001146295	0	-
chr18	25837418	25837441	7	1	-	chr18	25636120	25912484	Celf4|NM_001174074	0	-
chr18	25837418	25837441	7	1	-	chr18	25636120	25912484	Celf4|NM_001146293	0	-
chr18	25837418	25837441	7	1	-	chr18	25636120	25912484	Celf4|NM_001146292	0	-
chr18	25837418	25837441	7	1	-	chr18	25636120	25912484	Celf4|NM_133195	0	-
chr18	25837418	25837441	7	1	-	chr18	25636120	25912484	Celf4|NM_001146294	0	-
chr18	47406305	47406330	5	4	-	chr18	47404907	47528522	Sema6a|NM_018744	0	-
chr18	84377519	84377542	6	1	-	chr18	84377093	84758896	Zfp407|NM_001033341	0	-
chr19	17748340	17748369	36	23	-	chr19	17632648	17912122	Pcsk5|NM_001163144	0	-
chr19	17748340	17748369	36	23	-	chr19	17507321	17912122	Pcsk5|NM_001190483	0	-
chr19	29685909	29685932	14	12	-	chr19	29684372	29722910	Ermp1|NM_001081213	0	-
chr19	32750915	32750938	6	1	-	chr19	32747052	32786788	Atad1|NM_026487	0	-
chr19	57109620	57109643	31	2	-	chr19	57107753	57271982	Ablim1|NM_001103177	0	-
chr19	57109620	57109643	31	2	-	chr19	57107753	57193499	Ablim1|NM_001103178	0	-
chr19	57109620	57109643	31	2	-	chr19	57107753	57290522	Ablim1|NM_178688	0	-
chr2	6020606	6020632	30	3	-	chr2	6019545	6051231	5430407P10Rik|NM_001159657	0	-
chr2	6020606	6020632	30	3	-	chr2	6019545	6051231	5430407P10Rik|NM_144883	0	-
chr2	38929674	38929699	52	15	-	chr2	38921734	39046250	Scai|NM_178778	0	-
chr2	84172326	84172350	18	1	-	chr2	84170782	84265423	Calcrl|NM_018782	0	-
chr2	104598391	104598413	5	2	-	chr2	104594953	104656853	Qser1|NM_001123327	0	-
chr3	80489423	80489446	67	27	-	chr3	80488857	80606713	Gria2|NM_013540	0	-
chr3	80489423	80489446	67	27	-	chr3	80488857	80606713	Gria2|NM_001083806	0	-
chr3	108597538	108597562	6	1	-	chr3	108596097	108643420	Stxbp3a|NM_011504	0	-
chr3	115642751	115642780	11	5	-	chr3	115641890	115710324	Slc30a7|NM_023214	0	-
chr4	106810502	106810525	13	2	-	chr4	106806766	106850971	2210012G02Rik|NM_025617	0	-
chr4	117809627	117809650	5	3	-	chr4	117809608	117852648	Kdm4a|NM_001161823	0	-
chr4	118115274	118115296	5	1	-	chr4	118115021	118130100	Mpl|NM_001122949	0	-
chr4	118115274	118115296	5	1	-	chr4	118115021	118130100	Mpl|NM_010823	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NR_027864	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NM_145556	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NM_001008546	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NM_001008545	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NM_001003899	0	-
chr4	147989748	147989771	6	4	-	chr4	147986490	148001105	Tardbp|NM_001003898	0	-
chr5	33132393	33132420	26	2	-	chr5	33131855	33196879	C330019G07Rik|NM_194340	0	-
chr5	71143002	71143031	47	4	-	chr5	71142285	71233856	Gabrg1|NM_010252	0	-
chr5	93611081	93611104	8	2	-	chr5	93610958	93635521	Ccni|NM_017367	0	-
chr6	5171021	5171043	10	4	-	chr6	5170851	5206233	Pon3|NM_173006	0	-
chr6	91314417	91314441	10	1	-	chr6	91313976	91361363	Wnt7a|NM_009527	0	-
chr6	119307871	119307896	44	5	-	chr6	119303167	119367501	Adipor2|NM_197985	0	-
chr8	126365110	126365134	10	2	-	chr8	126364743	126384109	1700054N08Rik|NM_028536	0	-
chr9	39763057	39763080	8	1	-	chr9	39761841	39764654	Olfr976|NM_146367	0	-
chr9	57289233	57289258	9	9	-	chr9	57289133	57315831	Scamp5|NM_020270	0	-
chr9	61775030	61775055	12	1	-	chr9	61765084	61794606	Kif23|NM_024245	0	-
chr9	71352405	71352429	7	1	-	chr9	71352153	71440167	Gcom1|NM_001033208	0	-
chr9	107661225	107661252	213	22	-	chr9	107642825	107673333	Rbm5|NM_148930	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117161601	Rbms3|NM_178660	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117161601	Rbms3|NM_001172122	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117161601	Rbms3|NM_001172126	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117161601	Rbms3|NM_001172124	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117161601	Rbms3|NM_001172123	0	-
chr9	116482120	116482151	198	35	-	chr9	116481863	117539031	Rbms3|NM_001172121	0	-
chrX	35774109	35774133	24	9	-	chrX	35772685	35809632	Lamp2|NM_010685	0	-
chrX	35774109	35774133	24	9	-	chrX	35758240	35809632	Lamp2|NM_001017959	0	-
chrX	101274475	101274503	190	90	-	chrX	101272774	101396456	C77370|NM_001077354	0	-
chr1	31280698	31280725	112	9	+	chr1	31279683	31281132	4930521A18Rik|NM_029062	0	+
chr1	57031982	57032007	12	10	+	chr1	57028312	57032040	9130024F11Rik|NR_024325	0	+
chr1	57031982	57032007	12	10	+	chr1	57028312	57032040	9130024F11Rik|NR_024326	0	+
chr1	163435189	163435213	14	6	+	chr1	163424787	163435421	Tnfsf18|NM_183391	0	+
chr10	10325905	10325930	6	6	+	chr10	10325742	10336111	Gm5177|NR_033630	0	+
chr11	23631786	23631813	19	7	+	chr11	23565673	23632876	Pus10|NM_028956	0	+
chr11	23631786	23631813	19	7	+	chr11	23565975	23632876	Pus10|NM_028304	0	+
chr11	23631786	23631813	19	7	+	chr11	23565673	23632876	Pus10|NM_001033654	0	+
chr11	62129383	62129408	19	1	+	chr11	62094974	62129943	Ttc19|NM_029704	0	+
chr11	62129383	62129408	19	1	+	chr11	62094974	62129926	Ttc19|NM_028360	0	+
chr11	70464910	70464935	7	1	+	chr11	70461090	70464916	Rnf167|NM_027445	0	+
chr11	75383475	75383499	6	10	+	chr11	75345195	75391074	Slc43a2|NM_001199284	0	+
chr11	75383475	75383499	6	10	+	chr11	75345613	75391074	Slc43a2|NM_001199283	0	+
chr11	75383475	75383499	6	10	+	chr11	75345195	75391074	Slc43a2|NM_173388	0	+
chr11	87866138	87866162	6	1	+	chr11	87861172	87867259	Srsf1|NM_173374	0	+
chr11	87866138	87866162	6	1	+	chr11	87861172	87867259	Srsf1|NM_001078167	0	+
chr11	95243037	95243062	11	1	+	chr11	95198331	95243186	Fam117a|NM_172543	0	+
chr11	102543115	102543141	22	3	+	chr11	102526901	102543551	Gm1564|NM_001127576	0	+
chr11	113550469	113550483	5	1	+	chr11	113545725	113555961	D11Wsu47e|NM_177777	0	+
chr12	85002742	85002768	67	4	+	chr12	84973183	85024073	Rbm25|NM_027349	0	+
chr12	107051489	107051513	9	2	+	chr12	107022911	107077153	Papola|NM_011112	0	+
chr13	55419167	55419190	6	1	+	chr13	55311142	55419686	Nsd1|NM_008739	0	+
chr14	14936803	14936827	7	1	+	chr14	14845004	14939815	Atxn7|NM_139227	0	+
chr14	31688704	31688727	9	3	+	chr14	31638779	31690396	Tmem110|NM_028839	0	+
chr14	33752426	33752450	26	8	+	chr14	33669941	33752675	E130203B14Rik|NM_178791	0	+
chr14	58423111	58423137	32	2	+	chr14	58417025	58423817	Sap18|NM_009119	0	+
chr14	63544252	63544276	11	1	+	chr14	63456526	63575723	Wdfy2|NM_175546	0	+
chr14	64284110	64284134	35	4	+	chr14	64225366	64439247	Xkr6|NM_173393	0	+
chr15	38868912	38868936	38	4	+	chr15	38837825	38869736	Fzd6|NM_001162494	0	+
chr15	38868912	38868936	38	4	+	chr15	38837878	38869736	Fzd6|NM_008056	0	+
chr18	24051888	24051913	321	50	+	chr18	23962470	24052362	Mapre2|NM_153058	0	+
chr18	24051888	24051913	321	50	+	chr18	23910833	24052362	Mapre2|NM_001162942	0	+
chr18	24051888	24051913	321	50	+	chr18	23912225	24052362	Mapre2|NM_001162941	0	+
chr18	36961519	36961553	8	5	+	chr18	36961416	36961761	Vaultrc5|NR_027885	0	+
chr19	40086672	40086690	5	1	+	chr19	40066913	40086733	Cyp2c37|NM_010001	0	+
chr2	14998313	14998337	15	1	+	chr2	14976988	15000818	Arl5b|NM_029466	0	+
chr2	101538561	101538585	13	6	+	chr2	101518596	101541131	Traf6|NM_009424	0	+
chr2	118614576	118614599	6	2	+	chr2	118605454	118620911	Disp2|NM_170593	0	+
chr2	135078894	135078918	7	2	+	chr2	134611899	135300994	Plcb1|NM_019677	0	+
chr2	135078894	135078918	7	2	+	chr2	134611899	135300994	Plcb1|NM_001145830	0	+
chr2	181562274	181562294	5	1	+	chr2	181498036	181562480	Myt1|NM_001171615	0	+
chr2	181562274	181562294	5	1	+	chr2	181501733	181562480	Myt1|NM_008665	0	+
chr2	181562274	181562294	5	1	+	chr2	181531011	181562480	Myt1|NM_001171680	0	+
chr2	181562274	181562294	5	1	+	chr2	181501733	181562480	Myt1|NM_001171616	0	+
chr3	60812809	60812836	15	4	+	chr3	60806716	60812901	P2ry1|NM_008772	0	+
chr4	28893808	28893833	12	1	+	chr4	28740294	28894649	Epha7|NM_010141	0	+
chr4	44315323	44315346	9	1	+	chr4	44313788	44377547	Melk|NM_010790	0	+
chr4	45383253	45383282	19	1	+	chr4	45354972	45392594	Dcaf10|NM_153167	0	+
chr4	59234232	59234256	7	4	+	chr4	59202421	59235705	Ugcg|NM_011673	0	+
chr4	115449900	115449926	123	48	+	chr4	115410677	115449932	4732418C07Rik|NM_172698	0	+
chr4	153394891	153394914	7	3	+	chr4	153385911	153395621	Lrrc47|NM_201226	0	+
chr5	12587939	12587966	33	2	+	chr5	12383165	12588943	Sema3d|NM_028882	0	+
chr5	76967476	76967502	17	2	+	chr5	76958347	76999310	Exoc1|NM_027270	0	+
chr5	124419045	124419069	9	1	+	chr5	124380697	124419904	Ccdc62|NM_001134767	0	+
chr6	17786013	17786035	5	2	+	chr6	17699215	17893022	St7|NM_022332	0	+
chr6	17786013	17786035	5	2	+	chr6	17699215	17893022	St7|NM_001083315	0	+
chr6	38458565	38458589	9	1	+	chr6	38383924	38462763	Ubn2|NM_177185	0	+
chr6	113359760	113359785	491	26	+	chr6	113342490	113364565	Ttll3|NM_133923	0	+
chr6	143136286	143136309	12	1	+	chr6	143115749	143157066	Etnk1|NM_029250	0	+
chr7	16485041	16485065	22	13	+	chr7	16481472	16489379	Crxos1|NM_001033638	0	+
chr7	16485041	16485065	22	13	+	chr7	16467965	16485648	Crxos1|NR_038092	0	+
chr7	16485041	16485065	22	13	+	chr7	16481472	16485648	Crxos1|NM_001205274	0	+
chr8	15032112	15032136	131	26	+	chr8	15011024	15033332	Kbtbd11|NM_029116	0	+
chr8	116976928	116976953	6	1	+	chr8	116963551	117876612	Wwox|NM_019573	0	+
chr9	51895920	51895944	22	20	+	chr9	51855254	51896843	Rdx|NM_001104616	0	+
chr9	51895920	51895944	22	20	+	chr9	51856045	51896843	Rdx|NM_009041	0	+
chr9	74879954	74879979	35	2	+	chr9	74800859	74880275	BC031353|NM_001113283	0	+
chr9	74879954	74879979	35	2	+	chr9	74823917	74880275	BC031353|NM_153584	0	+
chr9	102446854	102446878	17	2	+	chr9	102408467	102448569	Ky|NM_024291	0	+
chr9	118951906	118951929	5	2	+	chr9	118835653	118953237	Ctdspl|NM_133710	0	+
chrX	126996054	126996076	5	1	+	chrX	126284277	127000369	Diap2|NM_172493	0	+
chrX	136640831	136640859	233	95	+	chrX	136597417	136641336	E230019M04Rik|NM_177921	0	+