chr1	3486832	3486858	1092	229	-	chr1	3204562	3661579	Xkr4|NM_001011874	0	-
chr1	10696042	10696065	9	3	-	chr1	10314807	10710024	Cpa6|NM_177834	0	-
chr1	20238566	20238587	6	3	-	chr1	20047859	20608138	Pkhd1|NM_153179	0	-
chr1	24483421	24483446	11	3	-	chr1	24264521	24594276	Col19a1|NM_007733	0	-
chr1	24563435	24563459	11	6	-	chr1	24264521	24594276	Col19a1|NM_007733	0	-
chr1	31263700	31263724	73	4	-	chr1	31197922	31279501	4931428L18Rik|NR_033445	0	-
chr1	94951034	94951057	14	1	-	chr1	94912032	94998442	Kif1a|NM_001110315	0	-
chr1	94951034	94951057	14	1	-	chr1	94912032	94998442	Kif1a|NM_008440	0	-
chr1	112824519	112824541	7	1	-	chr1	112785771	112873949	Cdh19|NM_001081386	0	-
chr1	112865728	112865752	12	2	-	chr1	112785771	112873949	Cdh19|NM_001081386	0	-
chr1	125248344	125248369	51	23	-	chr1	125228714	125942136	Dpp10|NM_199021	0	-
chr1	138129926	138129954	123	16	-	chr1	138110098	138130857	5730559C18Rik|NM_028872	0	-
chr1	140510425	140510449	7	1	-	chr1	140381290	140516273	Nek7|NM_021605	0	-
chr1	151946342	151946366	21	4	-	chr1	151923790	151946896	7530420F21Rik|NR_015466	0	-
chr1	157247149	157247174	50	26	-	chr1	157122786	157264574	Xpr1|NM_011273	0	-
chr1	165654597	165654622	10	1	-	chr1	165633123	165655363	Mettl11b|NM_001143956	0	-
chr1	171923299	171923322	7	14	-	chr1	171902437	172019075	Ddr2|NM_022563	0	-
chr1	181077398	181077423	8	1	-	chr1	180885169	181448134	Smyd3|NM_027188	0	-
chr1	181098874	181098899	351	194	-	chr1	180885169	181448134	Smyd3|NM_027188	0	-
chr1	187923270	187923298	66	5	-	chr1	187911610	187941189	Lyplal1|NM_146106	0	-
chr1	194415755	194415778	14	1	-	chr1	194336709	194597413	Hhat|NM_144881	0	-
chr10	13388363	13388387	13	2	-	chr10	13372514	13588636	Aig1|NM_025446	0	-
chr10	32387724	32387745	6	3	-	chr10	31670384	32609721	Nkain2|NM_001025286	0	-
chr10	32387724	32387745	6	3	-	chr10	31409124	32609721	Nkain2|NM_001013411	0	-
chr10	48883928	48883952	13	1	-	chr10	48819268	49508560	Grik2|NM_001111268	0	-
chr10	48883928	48883952	13	1	-	chr10	48819268	49508560	Grik2|NM_010349	0	-
chr10	49288242	49288271	135	28	-	chr10	48819268	49508560	Grik2|NM_001111268	0	-
chr10	49288242	49288271	135	28	-	chr10	48819268	49508560	Grik2|NM_010349	0	-
chr10	61868677	61868703	11	3	-	chr10	61845884	61885205	Hkdc1|NM_145419	0	-
chr10	62310385	62310411	17	1	-	chr10	62267317	62342762	Tet1|NM_027384	0	-
chr10	70046330	70046356	13	2	-	chr10	70020433	70055560	Phyhipl|NM_001162846	0	-
chr10	70046330	70046356	13	2	-	chr10	70020433	70062039	Phyhipl|NM_178621	0	-
chr10	89069059	89069084	36	2	-	chr10	89036764	89083994	Slc17a8|NM_182959	0	-
chr10	91558939	91558963	9	3	-	chr10	91544490	91627923	Rmst|NR_028262	0	-
chr10	124730659	124730687	35	2	-	chr10	124664540	124765591	Slc16a7|NM_011391	0	-
chr11	4459099	4459123	8	1	-	chr11	4380870	4494818	Mtmr3|NM_028860	0	-
chr11	21912279	21912303	7	2	-	chr11	21905830	22185841	Ehbp1|NM_153078	0	-
chr11	25575283	25575306	8	4	-	chr11	25516845	26110576	5730522E02Rik|NR_027973	0	-
chr11	25827648	25827674	10	4	-	chr11	25516845	26110576	5730522E02Rik|NR_027973	0	-
chr11	26055639	26055663	16	2	-	chr11	25516845	26110576	5730522E02Rik|NR_027973	0	-
chr11	28417765	28417797	12	5	-	chr11	28285691	28484296	Ccdc85a|NM_001166661	0	-
chr11	28417765	28417797	12	5	-	chr11	28285691	28484296	Ccdc85a|NM_181577	0	-
chr11	30119023	30119054	15	1	-	chr11	29999394	30119772	Spnb2|NM_175836	0	-
chr11	36638730	36638757	73	13	-	chr11	35820170	36757745	Odz2|NM_011856	0	-
chr11	46187862	46187886	16	4	-	chr11	46138651	46203017	Itk|NM_010583	0	-
chr11	58924938	58924963	16	20	-	chr11	58807758	58949877	Obscn|NM_001171512	0	-
chr11	58924938	58924963	16	20	-	chr11	58825642	58949877	Obscn|NM_199152	0	-
chr11	60033656	60033679	17	9	-	chr11	60012590	60034106	Srebf1|NM_011480	0	-
chr11	61163198	61163223	18	7	-	chr11	61156901	61191577	Slc47a1|NM_026183	0	-
chr11	68067039	68067064	28	3	-	chr11	68022865	68200328	Ntn1|NM_008744	0	-
chr11	84278756	84278783	27	13	-	chr11	84236357	84327003	Aatf|NM_019816	0	-
chr11	98025745	98025769	5	1	-	chr11	98014974	98054220	Med1|NM_013634	0	-
chr11	98025745	98025769	5	1	-	chr11	98014974	98054607	Med1|NM_001080118	0	-
chr11	98025745	98025769	5	1	-	chr11	98013468	98054607	Med1|NM_134027	0	-
chr11	98405213	98405236	8	4	-	chr11	98326006	98407345	Ikzf3|NM_011771	0	-
chr11	109967543	109967568	19	6	-	chr11	109962135	110029467	Abca9|NM_147220	0	-
chr11	118031902	118031924	10	1	-	chr11	118025479	118074056	Cyth1|NM_001112700	0	-
chr11	118031902	118031924	10	1	-	chr11	118025479	118109906	Cyth1|NM_001112699	0	-
chr11	118031902	118031924	10	1	-	chr11	118025479	118109906	Cyth1|NM_011180	0	-
chr12	31024797	31024822	22	5	-	chr12	30859421	31058240	Sntg2|NM_172951	0	-
chr12	33616263	33616288	16	7	-	chr12	33604248	33638654	4933406C10Rik|NR_044986	0	-
chr12	55962244	55962274	85	7	-	chr12	55959805	55963864	Cfl2|NM_007688	0	-
chr12	71128826	71128849	6	1	-	chr12	71112421	71203841	Nin|NM_001081453	0	-
chr12	71128826	71128849	6	1	-	chr12	71119726	71212912	Nin|NM_008697	0	-
chr12	71379235	71379259	37	13	-	chr12	71345523	71448601	Trim9|NM_053167	0	-
chr12	71379235	71379259	37	13	-	chr12	71345523	71448601	Trim9|NM_001110202	0	-
chr12	71379235	71379259	37	13	-	chr12	71364718	71448601	Trim9|NM_001110203	0	-
chr12	76098551	76098578	879	110	-	chr12	75998203	76278319	Kcnh5|NM_172805	0	-
chr12	99929878	99929904	18	2	-	chr12	99914950	99972855	Ptpn21|NM_011877	0	-
chr12	99929878	99929904	18	2	-	chr12	99914950	99975615	Ptpn21|NM_001146199	0	-
chr12	101954068	101954091	7	2	-	chr12	101787987	101963238	Rps6ka5|NM_153587	0	-
chr12	106030478	106030503	2474	1691	-	chr12	106001323	106103286	Clmn|NM_053155	0	-
chr12	106030478	106030503	2474	1691	-	chr12	106001323	106103286	Clmn|NM_001040682	0	-
chr13	3578576	3578599	33	3	-	chr13	3565280	3610354	BC016423|NM_134063	0	-
chr13	4146251	4146272	5	2	-	chr13	4131872	4149877	Akr1c18|NM_134066	0	-
chr13	11972353	11972377	20	5	-	chr13	11645369	12199212	Ryr2|NM_023868	0	-
chr13	14515281	14515305	8	5	-	chr13	14318704	14615493	Hecw1|NM_001081348	0	-
chr13	17056496	17056520	10	2	-	chr13	16949309	17786599	5033411D12Rik|NM_138654	0	-
chr13	17056496	17056520	10	1	-	chr13	16949309	17786599	5033411D12Rik|NM_138654	0	-
chr13	18253131	18253156	16	2	-	chr13	18216793	18473873	Pou6f2|NM_175006	0	-
chr13	43323743	43323767	7	5	-	chr13	43290887	43399541	Gfod1|NM_001033399	0	-
chr13	43539964	43539989	15	1	-	chr13	43498041	43576342	Ranbp9|NM_019930	0	-
chr13	45765531	45765564	1115	249	-	chr13	45645124	46060360	Atxn1|NM_001199305	0	-
chr13	45765531	45765564	1115	249	-	chr13	45645124	46060360	Atxn1|NM_001199304	0	-
chr13	45765531	45765564	1115	249	-	chr13	45645124	46060360	Atxn1|NM_009124	0	-
chr13	53247364	53247388	22	4	-	chr13	53204685	53381478	Ror2|NM_013846	0	-
chr13	69038862	69038885	6	5	-	chr13	68758919	69138419	Adcy2|NM_153534	0	-
chr13	81321125	81321146	7	1	-	chr13	81234066	81772143	Gpr98|NM_054053	0	-
chr13	81430303	81430327	18	3	-	chr13	81234066	81772143	Gpr98|NM_054053	0	-
chr13	96141048	96141081	50	10	-	chr13	96120671	96145289	Aggf1|NM_025630	0	-
chr13	98898833	98898856	8	2	-	chr13	98668549	98976120	Rgnef|NM_012026	0	-
chr13	104855914	104855940	18	3	-	chr13	104813518	104899694	Nln|NM_029447	0	-
chr13	113402994	113403018	17	3	-	chr13	113388540	113442518	Ddx4|NM_001145885	0	-
chr13	113402994	113403018	17	3	-	chr13	113388540	113442518	Ddx4|NM_010029	0	-
chr13	115857692	115857723	13	2	-	chr13	115748288	115892172	Itga1|NM_001033228	0	-
chr14	13417089	13417114	37	62	-	chr14	13205076	13655593	Cadps|NM_012061	0	-
chr14	13417089	13417114	37	62	-	chr14	13205076	13655593	Cadps|NM_001042617	0	-
chr14	19462168	19462192	8	2	-	chr14	19406090	19726141	Ube2e2|NM_144839	0	-
chr14	21267603	21267626	31	3	-	chr14	21213411	21271447	Ttc18|NM_029698	0	-
chr14	21267603	21267626	31	3	-	chr14	21213411	21271447	Ttc18|NM_001163639	0	-
chr14	21267603	21267626	31	3	-	chr14	21213411	21271447	Ttc18|NM_001163638	0	-
chr14	32636899	32636922	9	1	-	chr14	32513200	32643601	Ankrd28|NM_001024604	0	-
chr14	37754828	37754853	9	1	-	chr14	37688121	37781950	Gcap14|NM_027045	0	-
chr14	39792456	39792490	249	16	-	chr14	39182136	40286376	Nrg3|NM_008734	0	-
chr14	39792456	39792490	249	16	-	chr14	39182136	40286376	Nrg3|NM_001190188	0	-
chr14	39792456	39792490	249	16	-	chr14	39182136	40286376	Nrg3|NM_001190187	0	-
chr14	40056194	40056218	29	13	-	chr14	39182136	40286376	Nrg3|NM_008734	0	-
chr14	40056194	40056218	29	13	-	chr14	39182136	40286376	Nrg3|NM_001190188	0	-
chr14	40056194	40056218	29	13	-	chr14	39182136	40286376	Nrg3|NM_001190187	0	-
chr14	65061272	65061297	16	4	-	chr14	64741461	65074740	Msra|NM_026322	0	-
chr14	67657801	67657825	88	46	-	chr14	67632892	67691308	Ppp2r2a|NM_001205188	0	-
chr14	67657801	67657825	88	46	-	chr14	67632892	67691308	Ppp2r2a|NM_028032	0	-
chr14	70743997	70744021	14	18	-	chr14	70703273	70751231	Slc39a14|NM_144808	0	-
chr14	70743997	70744021	14	18	-	chr14	70703273	70748240	Slc39a14|NM_001135152	0	-
chr14	70743997	70744021	14	18	-	chr14	70703273	70751231	Slc39a14|NM_001135151	0	-
chr14	93685241	93685262	5	3	-	chr14	93412919	94287951	Pcdh9|NM_001081377	0	-
chr14	94141845	94141869	16	3	-	chr14	93412919	94287951	Pcdh9|NM_001081377	0	-
chr14	94146583	94146607	10	3	-	chr14	93412919	94287951	Pcdh9|NM_001081377	0	-
chr14	121964082	121964107	235	28	-	chr14	121941260	122196956	Dock9|NM_134074	0	-
chr14	121964082	121964107	235	28	-	chr14	121941260	122138151	Dock9|NM_001128308	0	-
chr14	121964082	121964107	235	28	-	chr14	121941260	122097639	Dock9|NM_001081039	0	-
chr14	121964082	121964107	235	28	-	chr14	121941260	122138151	Dock9|NM_001128307	0	-
chr14	121998697	121998720	13	3	-	chr14	121941260	122196956	Dock9|NM_134074	0	-
chr14	121998697	121998720	13	3	-	chr14	121941260	122138151	Dock9|NM_001128308	0	-
chr14	121998697	121998720	13	3	-	chr14	121941260	122097639	Dock9|NM_001081039	0	-
chr14	121998697	121998720	13	3	-	chr14	121941260	122138151	Dock9|NM_001128307	0	-
chr15	9658962	9658988	27	28	-	chr15	9592490	9678561	Spef2|NM_177123	0	-
chr15	12469321	12469344	78	63	-	chr15	12286808	12522311	Pdzd2|NM_001081064	0	-
chr15	26818087	26818106	8	1	-	chr15	26470213	26825319	Fbxl7|NM_176959	0	-
chr15	42291692	42291717	21	13	-	chr15	42256270	42508341	Angpt1|NM_009640	0	-
chr15	47934757	47934781	18	1	-	chr15	47412183	48623535	Csmd3|NM_001081391	0	-
chr15	48124846	48124871	17	1	-	chr15	47412183	48623535	Csmd3|NM_001081391	0	-
chr15	50595266	50595291	34	7	-	chr15	50486304	50721587	Trps1|NM_032000	0	-
chr15	58193797	58193814	6	2	-	chr15	58173018	58220829	Anxa13|NM_027211	0	-
chr15	58901269	58901292	15	1	-	chr15	58772788	58913581	Mtss1|NM_144800	0	-
chr15	58901269	58901292	15	1	-	chr15	58772788	58913581	Mtss1|NM_001146180	0	-
chr15	63880691	63880713	6	1	-	chr15	63760648	63892010	Fam49b|NM_144846	0	-
chr15	65907882	65907903	5	2	-	chr15	65826476	66117786	Kcnq3|NM_152923	0	-
chr15	66056152	66056175	9	1	-	chr15	65826476	66117786	Kcnq3|NM_152923	0	-
chr15	73231847	73231872	9	1	-	chr15	73035534	73253621	Ptk2|NM_007982	0	-
chr15	73231847	73231872	9	1	-	chr15	73045986	73253621	Ptk2|NM_001130409	0	-
chr15	75605171	75605199	329	26	-	chr15	75584876	75672338	Zc3h3|NM_172121	0	-
chr15	79659028	79659052	11	1	-	chr15	79654327	79664763	Cbx6|NM_028763	0	-
chr15	79659028	79659052	11	1	-	chr15	79616780	79664763	Npcd|NM_001013362	0	-
chr15	79659028	79659052	11	1	-	chr15	79616780	79664763	Npcd|NM_001013360	0	-
chr15	88527089	88527113	10	1	-	chr15	88517464	88564649	Brd1|NM_001033274	0	-
chr15	93136010	93136031	5	6	-	chr15	93114263	93167366	Yaf2|NM_024189	0	-
chr15	93136010	93136031	5	6	-	chr15	93114263	93167366	Yaf2|NR_028315	0	-
chr15	96424742	96424765	7	1	-	chr15	96401848	96473344	Slc38a1|NM_001166458	0	-
chr15	96424742	96424765	7	1	-	chr15	96401848	96472393	Slc38a1|NM_134086	0	-
chr15	96424742	96424765	7	1	-	chr15	96401848	96472774	Slc38a1|NM_001166456	0	-
chr16	10426497	10426521	28	10	-	chr16	10420651	10447443	Fam18a|NM_001013778	0	-
chr16	29342162	29342190	78	16	-	chr16	29231999	29378818	Atp13a5|NM_175650	0	-
chr16	52422823	52422848	12	1	-	chr16	52249108	52453110	Alcam|NM_009655	0	-
chr16	59811071	59811095	40	2	-	chr16	59653308	60605357	Epha6|NM_007938	0	-
chr16	60276576	60276602	15	3	-	chr16	59653308	60605357	Epha6|NM_007938	0	-
chr16	60525770	60525791	7	1	-	chr16	59653308	60605357	Epha6|NM_007938	0	-
chr16	63654291	63654316	28	2	-	chr16	63545043	63863983	Epha3|NM_010140	0	-
chr16	74024557	74024580	9	2	-	chr16	73892550	74411157	Robo2|NM_175549	0	-
chr16	75564306	75564330	14	4	-	chr16	75540788	75567927	Lipi|NM_177142	0	-
chr16	75904371	75904395	10	1	-	chr16	75859038	75909511	Samsn1|NM_023380	0	-
chr16	85872976	85872999	7	1	-	chr16	85858401	85901370	Adamts5|NM_011782	0	-
chr16	92611366	92611390	41	26	-	chr16	92601710	92697573	Runx1|NM_001111023	0	-
chr16	92611366	92611390	41	26	-	chr16	92601710	92826311	Runx1|NM_001111022	0	-
chr16	92611366	92611390	41	26	-	chr16	92601710	92826311	Runx1|NM_001111021	0	-
chr16	92611366	92611390	41	26	-	chr16	92601710	92697573	Runx1|NM_009821	0	-
chr16	96923315	96923339	5	1	-	chr16	96813686	97392342	Dscam|NM_031174	0	-
chr17	14972977	14972999	6	1	-	chr17	14955678	15080129	Wdr27|NM_175173	0	-
chr17	22934563	22934586	5	2	-	chr17	22916824	22954714	Gm16386|NR_030709	0	-
chr17	40915071	40915101	138	21	-	chr17	40901682	40931095	Crisp2|NM_001204071	0	-
chr17	40915071	40915101	138	21	-	chr17	40901682	40931095	Crisp2|NM_009420	0	-
chr17	42942866	42942891	18	8	-	chr17	42929899	43013373	Cd2ap|NM_009847	0	-
chr17	44767217	44767244	190	49	-	chr17	44740949	44873597	Runx2|NM_001145920	0	-
chr17	44767217	44767244	190	49	-	chr17	44740949	44951746	Runx2|NM_009820	0	-
chr17	44767217	44767244	190	49	-	chr17	44740949	44951746	Runx2|NM_001146038	0	-
chr17	72675127	72675151	21	2	-	chr17	72218327	72953647	Alk|NM_007439	0	-
chr17	74855984	74856009	11	8	-	chr17	74825634	74858448	Nlrc4|NM_001033367	0	-
chr17	84827020	84827046	43	6	-	chr17	84589395	84865548	Thada|NM_183021	0	-
chr17	89169431	89169456	142	20	-	chr17	89140888	89191316	Lhcgr|NM_013582	0	-
chr18	10175717	10175741	14	6	-	chr18	10064398	10181790	Rock1|NM_009071	0	-
chr18	43133736	43133758	8	3	-	chr18	42804924	43219125	Ppp2r2b|NM_028392	0	-
chr18	44735474	44735499	9	3	-	chr18	44584713	44971836	Mcc|NM_001085373	0	-
chr18	44735474	44735499	9	3	-	chr18	44584713	44821920	Mcc|NM_001085374	0	-
chr18	58313312	58313340	30	2	-	chr18	58168276	58369580	Fbn2|NM_010181	0	-
chr18	63230554	63230577	7	4	-	chr18	63169866	63546837	Fam38b|NM_001039485	0	-
chr18	70615896	70615920	13	1	-	chr18	70612793	70632134	4930503L19Rik|NM_172967	0	-
chr18	70623598	70623622	19	6	-	chr18	70612793	70632134	4930503L19Rik|NM_172967	0	-
chr18	71864561	71864592	38	4	-	chr18	71413285	72510723	Dcc|NM_007831	0	-
chr18	72494097	72494122	8	1	-	chr18	71413285	72510723	Dcc|NM_007831	0	-
chr18	78577914	78577941	30	4	-	chr18	78342882	78793689	Slc14a2|NM_207651	0	-
chr18	78577914	78577941	30	4	-	chr18	78379979	78793689	Slc14a2|NM_030683	0	-
chr19	11732609	11732623	5	2	-	chr19	11721773	11735049	Plac1l|NM_001037634	0	-
chr19	15989586	15989610	9	2	-	chr19	15979612	15999112	Psat1|NM_001205339	0	-
chr19	15989586	15989610	9	2	-	chr19	15979612	15999549	Psat1|NM_177420	0	-
chr19	17643852	17643882	82	36	-	chr19	17632648	17912122	Pcsk5|NM_001163144	0	-
chr19	17643852	17643882	82	36	-	chr19	17507321	17912122	Pcsk5|NM_001190483	0	-
chr19	17748341	17748368	14	9	-	chr19	17632648	17912122	Pcsk5|NM_001163144	0	-
chr19	17748341	17748368	14	9	-	chr19	17507321	17912122	Pcsk5|NM_001190483	0	-
chr19	24510477	24510503	25	4	-	chr19	24369285	24630317	Pip5k1b|NM_008846	0	-
chr19	29861478	29861501	11	5	-	chr19	29788891	29880499	9930021J03Rik|NM_172836	0	-
chr19	31438656	31438680	10	1	-	chr19	30638976	31738860	Prkg1|NM_011160	0	-
chr19	31438656	31438680	10	1	-	chr19	30638976	31839523	Prkg1|NM_001013833	0	-
chr19	33416983	33417006	8	1	-	chr19	33212234	33466785	Rnls|NM_001146342	0	-
chr19	33416983	33417006	8	1	-	chr19	33212234	33466785	Rnls|NM_001167818	0	-
chr19	44084861	44084885	7	2	-	chr19	44081280	44103737	Cyp2c44|NM_001167905	0	-
chr19	44084861	44084885	7	2	-	chr19	44079511	44103737	Cyp2c44|NM_001001446	0	-
chr19	59384899	59384923	16	1	-	chr19	59370573	59420270	Pdzd8|NM_001033222	0	-
chr19	59505130	59505157	48	3	-	chr19	59499593	59533125	Emx2os|NR_002863	0	-
chr2	21120680	21120704	14	2	-	chr2	21102357	21126992	Enkur|NM_027728	0	-
chr2	24595830	24595854	28	11	-	chr2	24462089	24618567	Cacna1b|NM_001042528	0	-
chr2	24595830	24595854	28	11	-	chr2	24461894	24618672	Cacna1b|NM_007579	0	-
chr2	34124691	34124721	25	8	-	chr2	34027428	34227556	Pbx3|NM_016768	0	-
chr2	38909931	38909954	9	2	-	chr2	38872022	38920926	Golga1|NM_029793	0	-
chr2	39077831	39077852	6	3	-	chr2	39052317	39081858	Ppp6c|NM_024209	0	-
chr2	41528082	41528106	6	2	-	chr2	40452292	42509118	Lrp1b|NM_053011	0	-
chr2	44887300	44887324	6	3	-	chr2	44839153	44968799	Zeb2|NM_015753	0	-
chr2	44913656	44913677	5	2	-	chr2	44839153	44968799	Zeb2|NM_015753	0	-
chr2	44948731	44948756	60	3	-	chr2	44839153	44968799	Zeb2|NM_015753	0	-
chr2	51816759	51816783	10	9	-	chr2	51804018	51828728	Nmi|NM_001141949	0	-
chr2	51816759	51816783	10	9	-	chr2	51804018	51828728	Nmi|NM_001141948	0	-
chr2	51816759	51816783	10	9	-	chr2	51804018	51828728	Nmi|NM_019401	0	-
chr2	58129300	58129325	14	2	-	chr2	58119863	58177218	Acvr1c|NM_001033369	0	-
chr2	58129300	58129325	14	2	-	chr2	58119863	58210169	Acvr1c|NM_001111030	0	-
chr2	68145943	68145968	33	11	-	chr2	68048503	68310038	Stk39|NM_016866	0	-
chr2	79698338	79698361	10	5	-	chr2	79674609	79969128	Pde1a|NM_016744	0	-
chr2	79698338	79698361	10	5	-	chr2	79674609	79969569	Pde1a|NM_001159582	0	-
chr2	91263036	91263062	40	4	-	chr2	91117984	91284799	1110051M20Rik|NM_175123	0	-
chr2	105412980	105413004	9	3	-	chr2	105376236	105510487	Pax6os1|NR_002867	0	-
chr2	112203566	112203592	16	6	-	chr2	112203175	112208184	Tmem85|NM_026519	0	-
chr2	120343265	120343289	8	2	-	chr2	120332565	120389567	Zfp106|NM_011743	0	-
chr2	122432298	122432321	7	2	-	chr2	122420208	122437013	Gatm|NM_025961	0	-
chr2	125838561	125838585	9	2	-	chr2	125809363	125971987	4930525F21Rik|NM_029455	0	-
chr2	155224431	155224455	18	2	-	chr2	155216391	155266519	Ncoa6|NM_019825	0	-
chr2	155224431	155224455	18	2	-	chr2	155216391	155266519	Ncoa6|NM_001242558	0	-
chr2	157897348	157897374	10	1	-	chr2	157896099	157917533	2010009K17Rik|NR_040609	0	-
chr3	26017910	26017936	16	2	-	chr3	25330762	26052229	Nlgn1|NM_001163387	0	-
chr3	26017910	26017936	16	2	-	chr3	25330762	26230831	Nlgn1|NM_138666	0	-
chr3	27413706	27413729	8	2	-	chr3	27315083	27609361	Fndc3b|NM_173182	0	-
chr3	30178133	30178159	271	85	-	chr3	30135490	30408409	Mecom|NM_021442	0	-
chr3	35894411	35894436	13	26	-	chr3	35858230	35899600	Mccc1|NM_023644	0	-
chr3	55612589	55612614	16	1	-	chr3	55429119	55987623	Nbea|NM_030595	0	-
chr3	55632101	55632125	16	3	-	chr3	55429119	55987623	Nbea|NM_030595	0	-
chr3	68716377	68716406	96	65	-	chr3	68696420	68808492	Ift80|NM_026641	0	-
chr3	81872894	81872918	13	4	-	chr3	81835925	81878633	Gucy1b3|NM_017469	0	-
chr3	81872894	81872918	13	4	-	chr3	81835925	81878633	Gucy1b3|NM_001161796	0	-
chr3	84357809	84357830	6	2	-	chr3	84299985	84386547	Arfip1|NM_001081093	0	-
chr3	94839517	94839544	103	72	-	chr3	94836626	94846467	Psmd4|NM_008951	0	-
chr3	95043724	95043748	159	49	-	chr3	95040841	95045031	Gm128|NM_001024841	0	-
chr3	100413320	100413345	10	4	-	chr3	100366126	100489396	Man1a2|NM_010763	0	-
chr3	102697359	102697382	8	2	-	chr3	102622421	102740023	Sycp1|NM_011516	0	-
chr3	104272218	104272242	15	1	-	chr3	104257905	104315779	Lrig2|NM_001025067	0	-
chr3	132746292	132746317	16	1	-	chr3	132645514	132754704	Gstcd|NM_026231	0	-
chr3	153177272	153177295	8	3	-	chr3	152865472	153388097	St6galnac3|NM_011372	0	-
chr3	157982458	157982477	6	1	-	chr3	157747402	158225185	Lrrc7|NM_001081358	0	-
chr4	6647804	6647828	21	2	-	chr4	6614532	6917870	Tox|NM_145711	0	-
chr4	14749109	14749133	5	2	-	chr4	14736651	14753734	Otud6b|NM_152812	0	-
chr4	24711159	24711194	60	13	-	chr4	24544419	24778233	Klhl32|NM_001163020	0	-
chr4	24711159	24711194	60	13	-	chr4	24544419	24778233	Klhl32|NM_001033531	0	-
chr4	36573998	36574033	239	217	-	chr4	35653896	36665996	Lingo2|NM_001166000	0	-
chr4	36573998	36574033	239	217	-	chr4	35653896	36898777	Lingo2|NM_001165999	0	-
chr4	46194231	46194255	15	2	-	chr4	46188093	46209183	Xpa|NM_011728	0	-
chr4	49460913	49460937	14	2	-	chr4	49456403	49463981	Acnat1|NM_001164565	0	-
chr4	65290179	65290203	9	16	-	chr4	65041836	66065517	Astn2|NM_019514	0	-
chr4	65290179	65290203	9	16	-	chr4	65041836	66065517	Astn2|NM_207109	0	-
chr4	75626625	75626647	12	2	-	chr4	75587142	76240203	Ptprd|NM_011211	0	-
chr4	75626625	75626647	12	2	-	chr4	75587142	75779380	Ptprd|NM_001014288	0	-
chr4	75709292	75709317	20	1	-	chr4	75587142	76240203	Ptprd|NM_011211	0	-
chr4	75709292	75709317	20	1	-	chr4	75587142	75779380	Ptprd|NM_001014288	0	-
chr4	90950155	90950179	14	8	-	chr4	90917456	91038746	Elavl2|NM_207686	0	-
chr4	90950155	90950179	14	8	-	chr4	90917456	91066675	Elavl2|NM_207685	0	-
chr4	90950155	90950179	14	8	-	chr4	90917456	91043187	Elavl2|NM_001177883	0	-
chr4	90950155	90950179	14	8	-	chr4	90917456	91038746	Elavl2|NM_010486	0	-
chr4	112083486	112083511	36	13	-	chr4	112058573	112106590	Skint9|NM_177864	0	-
chr4	113182929	113182953	8	1	-	chr4	113150495	113672108	Skint5|NM_001167876	0	-
chr4	113182929	113182953	8	1	-	chr4	113150495	113672108	Skint5|NM_001167878	0	-
chr4	116084876	116084901	13	2	-	chr4	115979366	116136788	Mast2|NM_008641	0	-
chr4	116084876	116084901	13	2	-	chr4	115979366	116136788	Mast2|NM_001042743	0	-
chr4	117895320	117895342	6	3	-	chr4	117880817	117964002	Ptprf|NM_011213	0	-
chr4	129011202	129011226	9	3	-	chr4	128984343	129012614	Rbbp4|NM_009030	0	-
chr4	134943834	134943858	16	2	-	chr4	134925491	134954142	A330049M08Rik|NM_145555	0	-
chr4	134943834	134943858	16	2	-	chr4	134925491	134954142	A330049M08Rik|NR_033135	0	-
chr4	134943834	134943858	16	2	-	chr4	134925491	134954142	A330049M08Rik|NM_001168500	0	-
chr4	134943834	134943858	16	2	-	chr4	134925491	134954142	A330049M08Rik|NM_001243306	0	-
chr4	141714060	141714087	115	46	-	chr4	141695154	141766123	Kazn|NM_001109684	0	-
chr4	141714060	141714087	115	46	-	chr4	141695154	141795316	Kazn|NM_001109685	0	-
chr4	141714060	141714087	115	46	-	chr4	141658304	141766123	Kazn|NM_144531	0	-
chr4	144734250	144734272	5	8	-	chr4	144565039	144780495	Vps13d|NM_001128198	0	-
chr5	7033058	7033086	328	27	-	chr5	6769029	7344378	Zfp804b|NM_001163223	0	-
chr5	17821964	17821990	8	6	-	chr5	17770952	17866231	Gnai1|NM_010305	0	-
chr5	21659297	21659324	1354	2570	-	chr5	21390271	21850523	Reln|NM_011261	0	-
chr5	49558091	49558116	27	3	-	chr5	48780741	49676898	Kcnip4|NM_001199244	0	-
chr5	72019319	72019345	17	1	-	chr5	71960972	72049547	Gabra4|NM_010251	0	-
chr5	73453388	73453412	7	1	-	chr5	73411429	73647857	Fryl|NM_028194	0	-
chr5	73721464	73721496	134	38	-	chr5	73713437	73729878	Ociad2|NM_026950	0	-
chr5	84526068	84526092	5	3	-	chr5	84483787	84846407	Epha5|NM_007937	0	-
chr5	100803416	100803442	16	3	-	chr5	100790667	100845253	Sec31a|NM_026969	0	-
chr5	102457314	102457338	33	5	-	chr5	102261971	102498940	Wdfy3|NM_172882	0	-
chr5	103489680	103489703	21	5	-	chr5	103336966	103640353	Mapk10|NM_001081567	0	-
chr5	103489680	103489703	21	5	-	chr5	103336966	103640353	Mapk10|NM_009158	0	-
chr5	108210673	108210707	4543	421	-	chr5	108173813	108304126	Evi5|NM_007964	0	-
chr5	116507967	116507990	7	1	-	chr5	116490542	116533255	Tmem233|NM_001101546	0	-
chr5	116936786	116936812	125	8	-	chr5	116889281	117041826	Srrm4|NM_026886	0	-
chr5	116975167	116975190	9	2	-	chr5	116889281	117041826	Srrm4|NM_026886	0	-
chr5	132090487	132090512	55	7	-	chr5	131913551	133018213	Auts2|NM_177047	0	-
chr5	132380487	132380517	98	14	-	chr5	131913551	133018213	Auts2|NM_177047	0	-
chr5	148161556	148161581	60	26	-	chr5	148142316	148212065	Flt3|NM_010229	0	-
chr6	4646380	4646412	58	4	-	chr6	4624349	4697204	Sgce|NM_011360	0	-
chr6	4646380	4646412	58	4	-	chr6	4624349	4697204	Sgce|NM_001130189	0	-
chr6	4646380	4646412	58	4	-	chr6	4624349	4697204	Sgce|NM_001130188	0	-
chr6	4646380	4646412	58	4	-	chr6	4624349	4697204	Sgce|NM_001130191	0	-
chr6	4646380	4646412	58	4	-	chr6	4624349	4697204	Sgce|NM_001130190	0	-
chr6	12349433	12349452	6	1	-	chr6	12261607	12699253	Thsd7a|NM_001164805	0	-
chr6	23682537	23682562	32	4	-	chr6	23212837	23789300	Cadps2|NM_153163	0	-
chr6	27423786	27423811	71	5	-	chr6	27225120	28084369	Grm8|NM_008174	0	-
chr6	32271592	32271617	112	11	-	chr6	32094558	32538192	Plxna4|NM_175750	0	-
chr6	50199080	50199104	18	2	-	chr6	50157401	50211768	Dfna5|NM_018769	0	-
chr6	51884662	51884692	27	2	-	chr6	51809163	51962548	Skap2|NM_018773	0	-
chr6	51960241	51960265	7	1	-	chr6	51809163	51962548	Skap2|NM_018773	0	-
chr6	52505772	52505808	13	1	-	chr6	52496223	52590294	Hibadh|NM_145567	0	-
chr6	52515640	52515665	7	3	-	chr6	52496223	52590294	Hibadh|NM_145567	0	-
chr6	52568510	52568537	19	2	-	chr6	52496223	52590294	Hibadh|NM_145567	0	-
chr6	58970719	58970742	11	5	-	chr6	58883529	58974496	Fam13a|NM_153574	0	-
chr6	70717609	70717632	11	4	-	chr6	70715713	70742169	Rpia|NM_009075	0	-
chr6	71841732	71841754	5	3	-	chr6	71830631	71858756	Ptcd3|NM_027275	0	-
chr6	87250497	87250524	51	5	-	chr6	87083846	87285769	Antxr1|NM_054041	0	-
chr6	92622011	92622044	187	26	-	chr6	92320885	92656178	Prickle2|NM_001081146	0	-
chr6	96965174	96965198	9	2	-	chr6	96781202	97010405	Fam19a4|NM_177233	0	-
chr6	99666322	99666345	6	4	-	chr6	99661292	99676386	Prok2|NM_015768	0	-
chr6	99666322	99666345	6	4	-	chr6	99661292	99676386	Prok2|NM_001170419	0	-
chr6	99666322	99666345	6	4	-	chr6	99661292	99676386	Prok2|NM_001037539	0	-
chr6	113687255	113687280	20	5	-	chr6	113678045	113690675	Sec13|NM_024206	0	-
chr6	124800627	124800651	89	84	-	chr6	124791112	124807705	Leprel2|NM_013534	0	-
chr6	126851480	126851503	5	1	-	chr6	126826216	126871857	Dyrk4|NM_207210	0	-
chr6	136019591	136019615	9	1	-	chr6	135679822	136123529	Grin2b|NM_008171	0	-
chr6	146304452	146304474	5	2	-	chr6	146060001	146450434	Itpr2|NM_010586	0	-
chr6	146304452	146304474	5	2	-	chr6	146060001	146450434	Itpr2|NM_019923	0	-
chr7	13189303	13189326	9	4	-	chr7	13166818	13191893	Vmn2r53|NM_001104644	0	-
chr7	52270461	52270486	18	2	-	chr7	52258319	52271619	Scaf1|NM_001008422	0	-
chr7	53807097	53807124	11	2	-	chr7	53698528	53895177	Sergef|NM_013789	0	-
chr7	67257013	67257039	18	1	-	chr7	67127387	67285105	Snrpn|NM_001082962	0	-
chr7	72105228	72105248	5	1	-	chr7	71900981	72301414	Fam189a1|NM_183087	0	-
chr7	79303627	79303650	7	1	-	chr7	79222715	79451481	Mctp2|NM_001024703	0	-
chr7	79311542	79311563	5	1	-	chr7	79222715	79451481	Mctp2|NM_001024703	0	-
chr7	88815917	88815942	915	249	-	chr7	88745366	88851811	Homer2|NM_011983	0	-
chr7	88815917	88815942	915	249	-	chr7	88745366	88837851	Homer2|NM_001164087	0	-
chr7	88815917	88815942	915	249	-	chr7	88745366	88851811	Homer2|NM_001164086	0	-
chr7	89068968	89068991	8	5	-	chr7	89026141	89079345	Hdgfrp3|NM_013886	0	-
chr7	111644141	111644164	7	2	-	chr7	111618528	111656363	Trim30d|NM_001167828	0	-
chr7	111644141	111644164	7	2	-	chr7	111618528	111656363	Trim30d|NM_199146	0	-
chr7	117591069	117591094	9	1	-	chr7	117451526	117758434	Sbf2|NM_177324	0	-
chr7	118662665	118662686	6	1	-	chr7	118615174	118923491	Galntl4|NM_173739	0	-
chr7	122814944	122814967	7	3	-	chr7	122614857	123138600	Sox6|NM_011445	0	-
chr7	122814944	122814967	7	3	-	chr7	122614857	123174561	Sox6|NM_001025560	0	-
chr7	122814944	122814967	7	3	-	chr7	122614857	123182258	Sox6|NM_001025559	0	-
chr7	135600495	135600519	8	7	-	chr7	135583290	135605027	Tial1|NM_009383	0	-
chr7	139973006	139973030	17	11	-	chr7	139903766	139978618	Fam53b|NM_175268	0	-
chr7	139973006	139973030	17	11	-	chr7	139903766	140004879	Fam53b|NM_212473	0	-
chr8	11200860	11200884	12	3	-	chr8	11198422	11312826	Col4a1|NM_009931	0	-
chr8	16749418	16749444	52	3	-	chr8	15892544	17535385	Csmd1|NM_053171	0	-
chr8	23042593	23042616	6	1	-	chr8	23040284	23043182	Defb15|NM_139222	0	-
chr8	30246800	30246824	16	1	-	chr8	29757188	30330108	Unc5d|NM_153135	0	-
chr8	39327803	39327826	5	3	-	chr8	38585607	39724562	Sgcz|NM_145841	0	-
chr8	39464603	39464629	23	6	-	chr8	38585607	39724562	Sgcz|NM_145841	0	-
chr8	39562216	39562242	53	15	-	chr8	38585607	39724562	Sgcz|NM_145841	0	-
chr8	54681493	54681517	458	273	-	chr8	54672220	54724419	Neil3|NM_146208	0	-
chr8	55792517	55792541	8	3	-	chr8	55714968	55809721	Wdr17|NM_001172152	0	-
chr8	55792517	55792541	8	3	-	chr8	55714968	55804031	Wdr17|NM_028220	0	-
chr8	60105519	60105544	7	2	-	chr8	60002621	60131852	Galnt7|NM_001167981	0	-
chr8	60105519	60105544	7	2	-	chr8	60002621	60131852	Galnt7|NM_144731	0	-
chr8	67526381	67526405	30	2	-	chr8	67522346	67542587	Trim60|NM_153097	0	-
chr8	70454152	70454178	140	53	-	chr8	70212980	70498473	Psd3|NM_177698	0	-
chr8	72866891	72866914	78	42	-	chr8	72855420	72877172	Upf1|NM_001122829	0	-
chr8	72866891	72866914	78	42	-	chr8	72855420	72877172	Upf1|NM_030680	0	-
chr8	75736317	75736341	30	24	-	chr8	75338497	75876455	Large|NM_010687	0	-
chr8	98292009	98292035	17	2	-	chr8	98243350	98331362	Cnot1|NM_153164	0	-
chr8	98292009	98292035	17	2	-	chr8	98243350	98331362	Cnot1|NM_178078	0	-
chr8	98292009	98292035	17	2	-	chr8	98243350	98331362	Cnot1|NM_001205226	0	-
chr8	125453257	125453292	142	83	-	chr8	125407721	125566184	Ankrd11|NM_001081379	0	-
chr8	125453257	125453292	142	83	-	chr8	125407721	125566184	Ankrd11|NR_037865	0	-
chr8	128398475	128398496	6	8	-	chr8	128275407	128422193	Pcnxl2|NM_175561	0	-
chr9	7073263	7073294	177	52	-	chr9	6928502	7177046	Dync2h1|NM_029851	0	-
chr9	48592994	48593018	10	1	-	chr9	48462401	48644050	Zbtb16|NM_001033324	0	-
chr9	50872652	50872675	7	6	-	chr9	50864884	50885199	Layn|NM_001033534	0	-
chr9	71763159	71763188	62	9	-	chr9	71692058	71959626	Tcf12|NM_011544	0	-
chr9	77148578	77148602	13	3	-	chr9	76949890	77195677	2310046A06Rik|NM_027150	0	-
chr9	79489497	79489522	22	8	-	chr9	79446797	79566485	Col12a1|NM_007730	0	-
chr9	96738483	96738507	19	3	-	chr9	96723761	96789841	Acpl2|NM_153420	0	-
chr9	100413401	100413424	16	16	-	chr9	100395421	100446472	Nck1|NM_010878	0	-
chr9	106562289	106562313	39	3	-	chr9	106561076	106588279	Tex264|NM_001081654	0	-
chr9	106562289	106562313	39	3	-	chr9	106561076	106587998	Tex264|NM_011573	0	-
chr9	107761673	107761704	32	2	-	chr9	107675890	107775150	Rbm6|NM_011251	0	-
chr9	107761673	107761704	32	2	-	chr9	107675890	107775150	Rbm6|NM_029169	0	-
chr9	108313879	108313902	6	1	-	chr9	108305963	108330813	Ccdc36|NM_001135198	0	-
chr9	116491462	116491495	56	3	-	chr9	116481863	117161601	Rbms3|NM_178660	0	-
chr9	116491462	116491495	56	3	-	chr9	116481863	117161601	Rbms3|NM_001172122	0	-
chr9	116491462	116491495	56	3	-	chr9	116481863	117161601	Rbms3|NM_001172126	0	-
chr9	116491462	116491495	56	3	-	chr9	116481863	117161601	Rbms3|NM_001172124	0	-
chr9	116491462	116491495	56	3	-	chr9	116481863	117161601	Rbms3|NM_001172123	0	-
chr9	116491462	116491495	56	3	-	chr9	116481863	117539031	Rbms3|NM_001172121	0	-
chr9	116844466	116844483	5	2	-	chr9	116481863	117161601	Rbms3|NM_178660	0	-
chr9	116844466	116844483	5	2	-	chr9	116481863	117161601	Rbms3|NM_001172122	0	-
chr9	116844466	116844483	5	2	-	chr9	116481863	117161601	Rbms3|NM_001172126	0	-
chr9	116844466	116844483	5	2	-	chr9	116481863	117161601	Rbms3|NM_001172124	0	-
chr9	116844466	116844483	5	2	-	chr9	116481863	117161601	Rbms3|NM_001172123	0	-
chr9	116844466	116844483	5	2	-	chr9	116481863	117539031	Rbms3|NM_001172121	0	-
chrX	45916216	45916241	6	1	-	chrX	45894802	45945310	Zfp280c|NM_153532	0	-
chrX	45916216	45916241	6	1	-	chrX	45894802	45947550	Zfp280c|NM_001166648	0	-
chrX	45916216	45916241	6	1	-	chrX	45894802	45944938	Zfp280c|NM_001166650	0	-
chrX	45916216	45916241	6	1	-	chrX	45894802	45947629	Zfp280c|NM_001166649	0	-
chrX	49863313	49863338	17	1	-	chrX	49625603	49967151	Gpc3|NM_016697	0	-
chrX	85349817	85349853	380	31	-	chrX	83992580	85360962	Il1rapl1|NM_001160403	0	-
chrX	90723526	90723546	7	1	-	chrX	90550104	90877494	Pola1|NM_008892	0	-
chrX	98036407	98036432	7	2	-	chrX	98033986	98254978	Tex11|NM_031384	0	-
chrX	98084832	98084862	33	2	-	chrX	98073220	98254978	Tex11|NM_001167997	0	-
chrX	98084832	98084862	33	2	-	chrX	98033986	98254978	Tex11|NM_031384	0	-
chrX	101810211	101810235	8	1	-	chrX	101732308	101866403	Zdhhc15|NM_175358	0	-
chrX	133530428	133530454	115	25	-	chrX	133515654	133572841	Mcart6|NM_001082412	0	-
chrX	137838376	137838400	27	6	-	chrX	137599945	137908619	Col4a6|NM_053185	0	-
chrX	138800047	138800070	7	3	-	chrX	138752535	138825078	Acsl4|NM_207625	0	-
chrX	138800047	138800070	7	3	-	chrX	138752535	138825078	Acsl4|NM_019477	0	-
chrX	138800047	138800070	7	3	-	chrX	138752535	138825078	Acsl4|NM_001033600	0	-
chrX	154435359	154435382	9	1	-	chrX	154259504	154481042	Cnksr2|NM_177751	0	-
chrX	157380475	157380503	72	6	-	chrX	157222239	157432613	Cdkl5|NM_001024624	0	-
chrX	161753980	161754006	17	4	-	chrX	161566948	161764913	Glra2|NM_183427	0	-
chr1	24237251	24237277	16	3	+	chr1	24184448	24259577	Col9a1|NM_007740	0	+
chr1	32624494	32624517	5	1	+	chr1	32229650	32714583	Khdrbs2|NM_133235	0	+
chr1	52186069	52186096	44	12	+	chr1	52176281	52218709	Stat1|NM_001205314	0	+
chr1	52186069	52186096	44	12	+	chr1	52176281	52218709	Stat1|NM_009283	0	+
chr1	52186069	52186096	44	12	+	chr1	52176465	52218709	Stat1|NM_001205313	0	+
chr1	62305753	62305784	24	5	+	chr1	61685397	62688858	Pard3b|NM_001081050	0	+
chr1	62540812	62540833	5	2	+	chr1	61685397	62688858	Pard3b|NM_001081050	0	+
chr1	74379216	74379239	8	14	+	chr1	74379183	74400266	Pnkd|NM_019999	0	+
chr1	74379216	74379239	8	14	+	chr1	74331607	74400266	Pnkd|NM_001039509	0	+
chr1	108841379	108841402	72	32	+	chr1	108831025	108853655	Serpinb12|NM_027971	0	+
chr1	108841379	108841402	72	32	+	chr1	108835533	108853657	Serpinb12|NM_001199213	0	+
chr1	131357030	131357055	26	7	+	chr1	131169880	132115855	Thsd7b|NM_172485	0	+
chr1	136305540	136305565	8	3	+	chr1	136302566	136308315	Cyb5r1|NM_028057	0	+
chr1	142181678	142181705	19	2	+	chr1	142142833	142506838	Kcnt2|NM_001081027	0	+
chr1	142345773	142345797	8	3	+	chr1	142142833	142506838	Kcnt2|NM_001081027	0	+
chr1	158254607	158254630	10	2	+	chr1	158240865	158258166	Nphs2|NM_130456	0	+
chr1	159447712	159447736	25	42	+	chr1	159436926	159498555	Sec16b|NR_027641	0	+
chr1	159447712	159447736	25	42	+	chr1	159436926	159498555	Sec16b|NM_033354	0	+
chr1	161549824	161549849	11	18	+	chr1	161453899	161855053	Tnr|NM_022312	0	+
chr1	184356459	184356484	9	2	+	chr1	184339297	184392567	Trp53bp2|NM_173378	0	+
chr1	189062297	189062321	12	1	+	chr1	189039389	189175308	Gpatch2|NM_026367	0	+
chr1	192756366	192756390	12	3	+	chr1	192752383	192770370	Angel2|NM_021421	0	+
chr1	192756366	192756390	12	3	+	chr1	192752383	192770370	Angel2|NR_037578	0	+
chr1	192756366	192756390	12	3	+	chr1	192752383	192770370	Angel2|NR_037579	0	+
chr1	192756366	192756390	12	3	+	chr1	192748986	192770370	Angel2|NM_001199020	0	+
chr10	19762590	19762618	77	17	+	chr10	19654331	19862556	Map3k5|NM_008580	0	+
chr10	32803711	32803735	19	3	+	chr10	32803288	33196515	Trdn|NM_029726	0	+
chr10	43102766	43102792	18	9	+	chr10	42941291	43184688	Pdss2|NM_001168289	0	+
chr10	43102766	43102792	18	9	+	chr10	42941291	43160054	Pdss2|NM_027772	0	+
chr10	51973231	51973255	5	4	+	chr10	51953424	52041183	Dcbld1|NM_025705	0	+
chr10	52414948	52414977	5808	2865	+	chr10	52410306	52831428	Slc35f1|NM_178675	0	+
chr10	63750970	63750993	5	1	+	chr10	62920258	64466415	Ctnna3|NM_001164376	0	+
chr10	63750970	63750993	5	1	+	chr10	62892845	64466415	Ctnna3|NM_177612	0	+
chr10	63750970	63750993	5	1	+	chr10	63283802	64466415	Ctnna3|NM_001164519	0	+
chr10	75995825	75995850	45	10	+	chr10	75994371	76016679	Lss|NM_146006	0	+
chr10	90131531	90131554	17	16	+	chr10	89336253	90435729	Anks1b|NM_001128086	0	+
chr10	90131531	90131554	17	16	+	chr10	90039435	90435729	Anks1b|NM_181398	0	+
chr10	90131531	90131554	17	16	+	chr10	90039435	90435729	Anks1b|NM_001177398	0	+
chr10	90131531	90131554	17	16	+	chr10	90038471	90435729	Anks1b|NM_001177397	0	+
chr10	90131531	90131554	17	16	+	chr10	90039435	90435729	Anks1b|NM_001177396	0	+
chr10	101356249	101356274	27	20	+	chr10	101144120	101854102	Mgat4c|NM_001205098	0	+
chr10	105910869	105910892	11	3	+	chr10	105907365	106370524	Ppfia2|NM_001205341	0	+
chr10	105910869	105910892	11	3	+	chr10	105907365	106370524	Ppfia2|NM_177373	0	+
chr10	106200931	106200956	20	13	+	chr10	105907365	106370524	Ppfia2|NM_001205341	0	+
chr10	106200931	106200956	20	13	+	chr10	105907365	106370524	Ppfia2|NM_177373	0	+
chr10	121186721	121186749	37	4	+	chr10	121176992	121189915	BC048403|NM_173022	0	+
chr10	123038024	123038051	37	12	+	chr10	122701131	123178035	Fam19a2|NM_182807	0	+
chr10	127338630	127338656	6	5	+	chr10	127335590	127348815	Sdr9c7|NM_027301	0	+
chr11	3577784	3577811	98	38	+	chr11	3549496	3590373	Morc2a|NM_001159288	0	+
chr11	3577784	3577811	98	38	+	chr11	3558702	3590375	Morc2a|NM_198162	0	+
chr11	9550677	9550705	33	5	+	chr11	9091944	9584262	Abca13|NM_178259	0	+
chr11	17059684	17059709	14	7	+	chr11	17059300	17100383	Ppp3r1|NM_024459	0	+
chr11	21488815	21488832	5	3	+	chr11	21472283	21798689	Wdpcp|NM_145425	0	+
chr11	23301907	23301931	10	2	+	chr11	23206894	23390560	Usp34|NM_001190401	0	+
chr11	33966548	33966571	25	19	+	chr11	33947200	33992280	Lcp2|NM_010696	0	+
chr11	34250771	34250797	15	7	+	chr11	34214821	34322640	Fam196b|NM_001025382	0	+
chr11	35357514	35357541	285	17	+	chr11	34934957	35522009	Slit3|NM_011412	0	+
chr11	49998556	49998580	7	1	+	chr11	49988352	50013617	3010026O09Rik|NM_026543	0	+
chr11	57052068	57052093	15	5	+	chr11	56825192	57143746	Gria1|NM_008165	0	+
chr11	57052068	57052093	15	5	+	chr11	56825192	57143746	Gria1|NM_001113325	0	+
chr11	59953029	59953059	21	4	+	chr11	59918514	60012697	Rai1|NM_009021	0	+
chr11	62802009	62802032	8	4	+	chr11	62764694	62806597	Cdrt4|NM_025496	0	+
chr11	70660371	70660394	8	7	+	chr11	70658264	70756607	Rabep1|NM_019400	0	+
chr11	70835506	70835540	3096	2836	+	chr11	70833112	70840636	Mis12|NM_025993	0	+
chr11	73057521	73057545	10	9	+	chr11	73051760	73074009	Trpv1|NM_001001445	0	+
chr11	77170589	77170614	8	2	+	chr11	77029926	77273721	Ssh2|NM_177710	0	+
chr11	79831073	79831099	116	6	+	chr11	79806607	79847625	Suz12|NM_001163018	0	+
chr11	79831073	79831099	116	6	+	chr11	79806607	79847625	Suz12|NM_199196	0	+
chr11	84698187	84698210	30	2	+	chr11	84693721	84724633	Myo19|NM_025414	0	+
chr11	105655015	105655043	18	4	+	chr11	105451299	105790617	Tanc2|NM_181071	0	+
chr11	115070856	115070880	15	4	+	chr11	115048800	115108339	Tmem104|NM_001033393	0	+
chr11	120343306	120343337	20	2	+	chr11	120328948	120345298	Hgs|NM_001159328	0	+
chr11	120343306	120343337	20	2	+	chr11	120328948	120345298	Hgs|NM_008244	0	+
chr12	3449683	3449707	12	4	+	chr12	3426883	3506849	Asxl2|NM_172421	0	+
chr12	30434129	30434149	10	2	+	chr12	30219769	30608074	Myt1l|NM_001093776	0	+
chr12	30434129	30434149	10	2	+	chr12	30213248	30608074	Myt1l|NM_001093775	0	+
chr12	30434129	30434149	10	2	+	chr12	30213248	30608074	Myt1l|NM_008666	0	+
chr12	30434129	30434149	10	2	+	chr12	30213248	30608074	Myt1l|NM_001093778	0	+
chr12	41419063	41419086	12	1	+	chr12	41172639	41573075	Dock4|NM_172803	0	+
chr12	42871037	42871066	14	1	+	chr12	41750676	43056573	Immp2l|NM_053122	0	+
chr12	54000787	54000815	9	6	+	chr12	53800369	54252002	Akap6|NM_198111	0	+
chr12	58714744	58714765	6	2	+	chr12	58665101	58723096	4921506M07Rik|NM_001037743	0	+
chr12	70405968	70405998	57	6	+	chr12	70397667	70411674	Klhdc2|NM_027117	0	+
chr12	71020768	71020795	18	7	+	chr12	70994091	71065072	Atl1|NM_178628	0	+
chr12	75036672	75036693	14	1	+	chr12	75008853	75048517	Hif1a|NM_010431	0	+
chr12	77996054	77996078	32	3	+	chr12	77938453	78022399	Fntb|NM_145927	0	+
chr12	84212982	84213008	13	5	+	chr12	83718024	84259799	Rgs6|NM_015812	0	+
chr12	84994261	84994285	23	4	+	chr12	84973183	85024073	Rbm25|NM_027349	0	+
chr12	87435406	87435430	22	4	+	chr12	87423510	87503409	1700019E19Rik|NM_029601	0	+
chr12	87435406	87435430	22	4	+	chr12	87423510	87503409	1700019E19Rik|NM_001199843	0	+
chr12	87793793	87793817	8	1	+	chr12	87762593	87862578	Esrrb|NM_011934	0	+
chr12	87793793	87793817	8	1	+	chr12	87702066	87862578	Esrrb|NM_001159500	0	+
chr12	89968042	89968065	18	1	+	chr12	89961319	91573373	Nrxn3|NM_001198587	0	+
chr12	92659382	92659408	126	40	+	chr12	92639432	92760981	Tshr|NM_001113404	0	+
chr12	92659382	92659408	126	40	+	chr12	92639432	92778949	Tshr|NM_011648	0	+
chr12	104621088	104621113	7	8	+	chr12	104615103	104644560	Otub2|NR_033587	0	+
chr12	107051489	107051513	17	2	+	chr12	107022911	107077153	Papola|NM_011112	0	+
chr13	36593487	36593511	18	4	+	chr13	36209279	36629462	Fars2|NM_024274	0	+
chr13	36593487	36593511	18	4	+	chr13	36209279	36629462	Fars2|NM_001039189	0	+
chr13	89016657	89016683	68	5	+	chr13	88961076	89462830	Edil3|NM_010103	0	+
chr13	89016657	89016683	68	5	+	chr13	88961076	89462830	Edil3|NM_001037987	0	+
chr13	118540427	118540446	5	1	+	chr13	118391126	118769835	Hcn1|NM_010408	0	+
chr14	60125781	60125804	6	2	+	chr14	60059817	60167740	Cab39l|NM_026908	0	+
chr14	77871312	77871336	8	8	+	chr14	77556622	78121214	Enox1|NM_172813	0	+
chr14	77943196	77943225	50	10	+	chr14	77556622	78121214	Enox1|NM_172813	0	+
chr14	79977951	79977980	25	4	+	chr14	79881000	79982283	Elf1|NM_007920	0	+
chr14	124345281	124345303	7	5	+	chr14	124059361	124373301	Itgbl1|NM_145467	0	+
chr15	18909524	18909549	26	16	+	chr15	18750083	18943989	Cdh10|NM_009865	0	+
chr15	21162302	21162327	18	2	+	chr15	21041206	21519288	Cdh12|NM_001008420	0	+
chr15	23152310	23152332	5	1	+	chr15	22966217	23404173	Cdh18|NM_001081299	0	+
chr15	23193812	23193834	6	1	+	chr15	22966217	23404173	Cdh18|NM_001081299	0	+
chr15	23197807	23197831	8	1	+	chr15	22966217	23404173	Cdh18|NM_001081299	0	+
chr15	25655294	25655317	18	1	+	chr15	25552304	25743426	Myo10|NM_019472	0	+
chr15	30755317	30755341	9	2	+	chr15	30102347	30959098	Ctnnd2|NM_008729	0	+
chr15	30860163	30860189	17	4	+	chr15	30102347	30959098	Ctnnd2|NM_008729	0	+
chr15	32477719	32477743	11	4	+	chr15	32174567	32626096	Sema5a|NM_009154	0	+
chr15	33192874	33192904	52	13	+	chr15	33012883	33524307	Pgcp|NM_176073	0	+
chr15	33192874	33192904	52	13	+	chr15	33012883	33524307	Pgcp|NM_018755	0	+
chr15	39145977	39146001	18	17	+	chr15	39029877	39513486	Rims2|NM_053271	0	+
chr15	39296113	39296138	9	1	+	chr15	39029877	39513486	Rims2|NM_053271	0	+
chr15	40830883	40830905	5	1	+	chr15	40486587	40936138	Zfpm2|NM_011766	0	+
chr15	55256140	55256166	16	1	+	chr15	55139304	55352358	Col14a1|NM_181277	0	+
chr15	78813148	78813169	5	1	+	chr15	78778153	78836299	Triobp|NM_138579	0	+
chr15	78813148	78813169	5	1	+	chr15	78778153	78836299	Triobp|NM_001039156	0	+
chr15	93304756	93304780	12	1	+	chr15	93228780	93322343	Pphln1|NM_001083114	0	+
chr15	93304756	93304780	12	1	+	chr15	93228780	93322343	Pphln1|NM_146062	0	+
chr15	93304756	93304780	12	1	+	chr15	93228780	93322343	Pphln1|NM_175363	0	+
chr16	6600735	6600760	66	7	+	chr16	5884885	7412573	Rbfox1|NM_021477	0	+
chr16	23154026	23154051	20	2	+	chr16	23146608	23158041	Adipoq|NM_009605	0	+
chr16	24727042	24727068	32	5	+	chr16	24393435	24992664	Lpp|NM_178665	0	+
chr16	24727042	24727068	32	5	+	chr16	24721940	24992664	Lpp|NM_001145954	0	+
chr16	24727042	24727068	32	5	+	chr16	24448176	24992664	Lpp|NM_001145952	0	+
chr16	25363699	25363720	5	3	+	chr16	25286902	25422430	Tprg|NM_175165	0	+
chr16	35287877	35287909	26	3	+	chr16	35155721	35304635	Adcy5|NM_001012765	0	+
chr16	35960794	35960819	16	13	+	chr16	35938555	35972691	Parp9|NM_030253	0	+
chr16	41699085	41699111	20	1	+	chr16	41533454	42146326	Lsamp|NM_175548	0	+
chr16	62868924	62868949	22	2	+	chr16	62854159	62929166	Pros1|NM_011173	0	+
chr16	70538786	70538811	17	3	+	chr16	70314331	70569961	Gbe1|NM_028803	0	+
chr16	81266578	81266604	12	2	+	chr16	81200941	81624532	Ncam2|NM_001113208	0	+
chr16	81266578	81266604	12	2	+	chr16	81200941	81598050	Ncam2|NM_010954	0	+
chr16	81612229	81612250	6	2	+	chr16	81200941	81624532	Ncam2|NM_001113208	0	+
chr17	5666389	5666415	11	1	+	chr17	5492599	5753891	Zdhhc14|NM_146073	0	+
chr17	11606183	11606206	22	2	+	chr17	11033249	12256226	Park2|NM_016694	0	+
chr17	25778301	25778325	16	2	+	chr17	25716118	25799668	Lmf1|NM_029624	0	+
chr17	56188290	56188315	10	4	+	chr17	56179838	56207449	Chaf1a|NM_013733	0	+
chr17	56204038	56204063	10	1	+	chr17	56179838	56207449	Chaf1a|NM_013733	0	+
chr17	87735563	87735586	7	2	+	chr17	87682225	87781110	Ttc7|NM_028639	0	+
chr18	5624657	5624681	7	1	+	chr18	5591888	5774909	Zeb1|NM_011546	0	+
chr18	7911462	7911489	20	2	+	chr18	7869194	7929025	Wac|NM_001146298	0	+
chr18	7911462	7911489	20	2	+	chr18	7868855	7929025	Wac|NR_027465	0	+
chr18	7911462	7911489	20	2	+	chr18	7869194	7929025	Wac|NM_153085	0	+
chr18	14983585	14983608	6	1	+	chr18	14941753	15058868	Taf4b|NM_001100449	0	+
chr18	23607208	23607231	19	6	+	chr18	23573915	23818215	Dtna|NM_207650	0	+
chr18	23607208	23607231	19	6	+	chr18	23573915	23762732	Dtna|NM_010087	0	+
chr18	38593059	38593081	7	2	+	chr18	38578628	38624060	Ndfip1|NM_022996	0	+
chr18	52631575	52631598	51	10	+	chr18	52625346	52650392	Srfbp1|NM_026040	0	+
chr18	52811119	52811144	27	7	+	chr18	52805873	52823385	1700034E13Rik|NM_030097	0	+
chr18	57335883	57335908	97	5	+	chr18	57292743	57457121	Megf10|NM_001001979	0	+
chr18	60969356	60969380	20	2	+	chr18	60963502	60972306	Cd74|NM_001042605	0	+
chr18	60969356	60969380	20	2	+	chr18	60963502	60972306	Cd74|NM_010545	0	+
chr18	65161261	65161284	21	6	+	chr18	65047409	65377480	Nedd4l|NM_001114386	0	+
chr18	69579018	69579048	3462	487	+	chr18	69505374	69847621	Tcf4|NM_001083967	0	+
chr18	69579018	69579048	3462	487	+	chr18	69504145	69847621	Tcf4|NM_013685	0	+
chr19	3770698	3770723	36	44	+	chr19	3767420	3818303	Suv420h1|NM_144871	0	+
chr19	3770698	3770723	36	44	+	chr19	3767420	3806324	Suv420h1|NM_001167884	0	+
chr19	3770698	3770723	36	44	+	chr19	3767420	3808829	Suv420h1|NM_001167889	0	+
chr19	3770698	3770723	36	44	+	chr19	3767420	3806324	Suv420h1|NM_001167888	0	+
chr19	3770698	3770723	36	44	+	chr19	3767420	3818303	Suv420h1|NM_001167886	0	+
chr19	3770698	3770723	36	44	+	chr19	3767420	3818303	Suv420h1|NM_001167885	0	+
chr19	3770698	3770723	36	44	+	chr19	3767420	3818303	Suv420h1|NM_001167887	0	+
chr19	18872249	18872272	30	2	+	chr19	18824472	18967001	Trpm6|NM_153417	0	+
chr19	22569730	22569754	12	4	+	chr19	22522697	23064374	Trpm3|NM_177341	0	+
chr19	22569730	22569754	12	4	+	chr19	22213606	23064372	Trpm3|NM_001035243	0	+
chr19	22569730	22569754	12	4	+	chr19	22213606	23064372	Trpm3|NM_001035242	0	+
chr19	22569730	22569754	12	4	+	chr19	22213606	23064372	Trpm3|NM_001035241	0	+
chr19	22569730	22569754	12	4	+	chr19	22213606	23064372	Trpm3|NM_001035240	0	+
chr19	22569730	22569754	12	4	+	chr19	22213606	23064372	Trpm3|NM_001035239	0	+
chr19	22861189	22861213	7	1	+	chr19	22522697	23064374	Trpm3|NM_177341	0	+
chr19	22861189	22861213	7	1	+	chr19	22767108	23000979	Trpm3|NM_001035244	0	+
chr19	22861189	22861213	7	1	+	chr19	22213606	23064372	Trpm3|NM_001035243	0	+
chr19	22861189	22861213	7	1	+	chr19	22213606	23064372	Trpm3|NM_001035242	0	+
chr19	22861189	22861213	7	1	+	chr19	22213606	23064372	Trpm3|NM_001035241	0	+
chr19	22861189	22861213	7	1	+	chr19	22213606	23064372	Trpm3|NM_001035240	0	+
chr19	22861189	22861213	7	1	+	chr19	22213606	23064372	Trpm3|NM_001035239	0	+
chr19	25318258	25318283	127	10	+	chr19	25311691	25508986	Kank1|NM_181404	0	+
chr19	34368957	34368981	20	1	+	chr19	34365148	34402260	Fas|NM_007987	0	+
chr19	34368957	34368981	20	1	+	chr19	34365148	34383840	Fas|NM_001146708	0	+
chr19	37017698	37017725	64	7	+	chr19	37000568	37088547	Btaf1|NM_001080706	0	+
chr19	37635629	37635656	45	10	+	chr19	37624907	37757739	Exoc6|NM_175353	0	+
chr19	46865893	46865920	228	14	+	chr19	46836098	46953070	Cnnm2|NM_033569	0	+
chr19	46865893	46865920	228	14	+	chr19	46836098	46953070	Cnnm2|NM_001102471	0	+
chr19	48865069	48865094	55	7	+	chr19	48280514	48879995	Sorcs3|NM_025696	0	+
chr2	6291711	6291735	6	6	+	chr2	6243802	6364866	Usp6nl|NM_001080548	0	+
chr2	6291711	6291735	6	6	+	chr2	6273781	6364866	Usp6nl|NM_181399	0	+
chr2	10094252	10094280	39	2	+	chr2	10075169	10178156	Itih5|NM_172471	0	+
chr2	20360039	20360055	5	1	+	chr2	20211539	20732162	Etl4|NM_001081006	0	+
chr2	23185172	23185197	12	2	+	chr2	23176765	23257493	Nxph2|NM_008752	0	+
chr2	43990186	43990209	6	1	+	chr2	43604343	44243143	Arhgap15|NM_153820	0	+
chr2	48899834	48899862	105	28	+	chr2	48805027	49172589	Mbd5|NM_029924	0	+
chr2	54353899	54353925	15	1	+	chr2	54288797	54970155	Galnt13|NM_173030	0	+
chr2	65737651	65737675	12	3	+	chr2	65683823	65869603	Csrnp3|NM_178634	0	+
chr2	65737651	65737675	12	3	+	chr2	65683823	65869603	Csrnp3|NM_153409	0	+
chr2	66352120	66352145	12	4	+	chr2	66278936	66385529	Gm13629|NR_033495	0	+
chr2	80458518	80458541	8	1	+	chr2	80457370	80471818	Dusp19|NM_024438	0	+
chr2	92780637	92780660	7	1	+	chr2	92755257	92796208	Syt13|NM_030725	0	+
chr2	97429467	97429491	12	7	+	chr2	97307830	97471821	Lrrc4c|NM_178725	0	+
chr2	113176397	113176419	6	1	+	chr2	113167892	113556924	Fmn1|NM_010230	0	+
chr2	113176397	113176419	6	1	+	chr2	113167892	113556924	Fmn1|NM_001043322	0	+
chr2	134810449	134810472	10	2	+	chr2	134611899	135300994	Plcb1|NM_019677	0	+
chr2	134810449	134810472	10	2	+	chr2	134611899	135300994	Plcb1|NM_001145830	0	+
chr2	141003683	141003710	168	61	+	chr2	140221165	142215786	Macrod2|NM_001013802	0	+
chr2	145213575	145213598	48	7	+	chr2	145068346	145467675	Slc24a3|NM_053195	0	+
chr2	147093165	147093194	103	6	+	chr2	147009818	147157417	Nkx2-2as|NR_030769	0	+
chr2	153709059	153709086	14	1	+	chr2	153700780	153721006	Bpifb2|NM_025631	0	+
chr2	160520409	160520435	43	8	+	chr2	160471632	160548499	Top1|NM_009408	0	+
chr2	169656417	169656443	27	2	+	chr2	169459145	169714004	Tshz2|NM_080455	0	+
chr2	170323822	170323848	29	11	+	chr2	170321927	170344570	Pfdn4|NM_001013369	0	+
chr2	179182904	179182931	43	5	+	chr2	179177182	179634080	Cdh4|NM_009867	0	+
chr2	179612717	179612743	170	105	+	chr2	179177182	179634080	Cdh4|NM_009867	0	+
chr3	19415995	19416011	5	3	+	chr3	19408594	19510862	Dnajc5b|NM_025489	0	+
chr3	19415995	19416011	5	3	+	chr3	19408594	19510862	Dnajc5b|NM_001163536	0	+
chr3	19857733	19857757	5	1	+	chr3	19857053	19892937	Cp|NM_007752	0	+
chr3	19857733	19857757	5	1	+	chr3	19857053	19907609	Cp|NM_001042611	0	+
chr3	30941618	30941643	15	5	+	chr3	30894692	30951662	Prkci|NM_008857	0	+
chr3	36921147	36921172	11	1	+	chr3	36762027	36951955	4932438A13Rik|NM_172679	0	+
chr3	38806448	38806470	8	1	+	chr3	38785861	38910905	Fat4|NM_183221	0	+
chr3	38876772	38876802	242	39	+	chr3	38785861	38910905	Fat4|NM_183221	0	+
chr3	52911913	52911937	12	1	+	chr3	52845468	53065601	Lhfp|NM_175386	0	+
chr3	58262498	58262521	8	1	+	chr3	58219610	58270709	Tsc22d2|NM_001081229	0	+
chr3	58349804	58349829	8	1	+	chr3	58329742	58361423	Eif2a|NM_001005509	0	+
chr3	58956382	58956406	8	4	+	chr3	58810899	59122334	Med12l|NM_177855	0	+
chr3	65121912	65121937	306	102	+	chr3	64913564	65182141	Kcnab1|NM_010597	0	+
chr3	67077967	67077991	8	1	+	chr3	66789593	67162325	Rsrc1|NM_025822	0	+
chr3	67764928	67764954	14	10	+	chr3	67696141	67860515	Iqcj|NM_177585	0	+
chr3	67764928	67764954	14	10	+	chr3	67696141	68430404	Iqcj-schip1|NM_001113419	0	+
chr3	73106267	73106290	6	12	+	chr3	72870272	73398752	LOC626082|NR_040557	0	+
chr3	76065910	76065933	9	2	+	chr3	75878519	76513927	Fstl5|NM_178673	0	+
chr3	88112908	88112934	352	80	+	chr3	88101056	88125688	Cct3|NM_009836	0	+
chr3	88112908	88112934	352	80	+	chr3	88101037	88125689	Cct3|NM_001243065	0	+
chr3	88510734	88510758	9	2	+	chr3	88489715	88516855	2810403A07Rik|NM_028814	0	+
chr3	103151183	103151208	10	4	+	chr3	103083215	103162691	Trim33|NM_001079830	0	+
chr3	103151183	103151208	10	4	+	chr3	103083215	103162691	Trim33|NM_053170	0	+
chr3	105396813	105396828	5	1	+	chr3	105261733	105472127	Kcnd3|NM_019931	0	+
chr3	105396813	105396828	5	1	+	chr3	105255247	105476920	Kcnd3|NM_001039347	0	+
chr3	107084419	107084446	731	83	+	chr3	107081775	107086999	Hbxip|NM_026774	0	+
chr3	109202326	109202350	30	10	+	chr3	109143600	109488612	Vav3|NM_020505	0	+
chr3	114755434	114755459	68	4	+	chr3	114607280	114828174	Olfm3|NM_153458	0	+
chr3	130138757	130138782	73	9	+	chr3	129883795	130298050	Col25a1|NM_029838	0	+
chr3	130138757	130138782	73	9	+	chr3	129883795	130299335	Col25a1|NM_198711	0	+
chr3	157255624	157255649	26	12	+	chr3	157229855	157307722	Ptger3|NM_011196	0	+
chr4	13792031	13792054	25	7	+	chr4	13678443	13820790	Runx1t1|NM_001111027	0	+
chr4	13792031	13792054	25	7	+	chr4	13670448	13820790	Runx1t1|NM_001111026	0	+
chr4	13792031	13792054	25	7	+	chr4	13711928	13820790	Runx1t1|NM_009822	0	+
chr4	14799671	14799693	8	1	+	chr4	14791365	14842407	Tmem55a|NM_028264	0	+
chr4	14807371	14807396	6	4	+	chr4	14791365	14842407	Tmem55a|NM_028264	0	+
chr4	17872067	17872093	18	1	+	chr4	17780628	18045881	Mmp16|NM_019724	0	+
chr4	21861261	21861285	14	2	+	chr4	21858472	21928608	6230409E13Rik|NM_175234	0	+
chr4	28746308	28746326	7	4	+	chr4	28740294	28874603	Epha7|NM_001122889	0	+
chr4	28746308	28746326	7	4	+	chr4	28740294	28894649	Epha7|NM_010141	0	+
chr4	32818773	32818805	17	8	+	chr4	32744093	32862192	Mdn1|NM_001081392	0	+
chr4	44777130	44777154	11	2	+	chr4	44769430	44945086	Zcchc7|NM_138590	0	+
chr4	48683363	48683389	20	1	+	chr4	48676385	48686364	Murc|NM_026509	0	+
chr4	73957305	73957329	8	4	+	chr4	73897782	74051768	Kdm4c|NM_144787	0	+
chr4	73957305	73957329	8	4	+	chr4	73888400	74051768	Kdm4c|NM_001172095	0	+
chr4	84740145	84740172	152	42	+	chr4	84530230	84777822	Cntln|NM_175275	0	+
chr4	85950395	85950419	13	8	+	chr4	85699818	86074286	Adamtsl1|NM_029967	0	+
chr4	88800875	88800892	5	1	+	chr4	88783273	88826994	Mtap|NM_024433	0	+
chr4	101187656	101187682	36	10	+	chr4	101180580	101315404	Dnajc6|NM_001164585	0	+
chr4	101187656	101187682	36	10	+	chr4	101180580	101315404	Dnajc6|NM_001164584	0	+
chr4	101187656	101187682	36	10	+	chr4	101169252	101315404	Dnajc6|NM_198412	0	+
chr4	107141020	107141046	19	4	+	chr4	107107323	107307664	Glis1|NM_147221	0	+
chr4	108195195	108195219	11	2	+	chr4	108132030	108232020	Zcchc11|NM_175472	0	+
chr4	109503031	109503054	7	1	+	chr4	109349231	109636565	Faf1|NM_007983	0	+
chr4	110100708	110100735	19	2	+	chr4	110070395	111330115	Agbl4|NM_001048189	0	+
chr4	110100708	110100735	19	2	+	chr4	110070395	111330115	Agbl4|NM_030231	0	+
chr4	128359030	128359054	17	1	+	chr4	128331945	128430125	Phc2|NM_001195130	0	+
chr4	130237478	130237501	11	2	+	chr4	130219273	130337479	Pum1|NM_030722	0	+
chr4	130237478	130237501	11	2	+	chr4	130219273	130337479	Pum1|NM_001159606	0	+
chr4	130237478	130237501	11	2	+	chr4	130219273	130337479	Pum1|NM_001159605	0	+
chr4	130237478	130237501	11	2	+	chr4	130219273	130337479	Pum1|NM_001159604	0	+
chr4	130237478	130237501	11	2	+	chr4	130219273	130337479	Pum1|NM_001159603	0	+
chr5	3837962	3837987	408	48	+	chr5	3803164	3844515	Krit1|NM_001170552	0	+
chr5	3837962	3837987	408	48	+	chr5	3803180	3844515	Krit1|NR_033173	0	+
chr5	3837962	3837987	408	48	+	chr5	3803164	3844515	Krit1|NM_030675	0	+
chr5	15632507	15632531	7	7	+	chr5	15440508	15880329	Cacna2d1|NM_001110844	0	+
chr5	15632507	15632531	7	7	+	chr5	15440508	15880329	Cacna2d1|NM_001110846	0	+
chr5	15632507	15632531	7	7	+	chr5	15440508	15880329	Cacna2d1|NM_001110843	0	+
chr5	15632507	15632531	7	7	+	chr5	15440508	15880329	Cacna2d1|NM_001110845	0	+
chr5	15632507	15632531	7	7	+	chr5	15440508	15880329	Cacna2d1|NM_009784	0	+
chr5	17090452	17090474	6	1	+	chr5	17080633	17236085	Sema3c|NM_013657	0	+
chr5	19230059	19230083	17	1	+	chr5	18732863	20210609	Magi2|NM_001170746	0	+
chr5	19567047	19567078	30	20	+	chr5	19413335	20210609	Magi2|NM_015823	0	+
chr5	19567047	19567078	30	20	+	chr5	19413335	20210610	Magi2|NM_001170745	0	+
chr5	19567047	19567078	30	20	+	chr5	18732863	20210609	Magi2|NM_001170746	0	+
chr5	22977637	22977661	9	1	+	chr5	22940246	23010047	Mll5|NM_026984	0	+
chr5	27330028	27330057	26	3	+	chr5	27143896	28054040	Dpp6|NM_010075	0	+
chr5	27330028	27330057	26	3	+	chr5	27231317	28054040	Dpp6|NM_001198886	0	+
chr5	27989960	27989987	87	9	+	chr5	27375738	28054040	Dpp6|NM_207282	0	+
chr5	27989960	27989987	87	9	+	chr5	27588474	28054040	Dpp6|NM_001136060	0	+
chr5	27989960	27989987	87	9	+	chr5	27143896	28054040	Dpp6|NM_010075	0	+
chr5	27989960	27989987	87	9	+	chr5	27231317	28054040	Dpp6|NM_001198886	0	+
chr5	63244972	63244998	320	102	+	chr5	63205061	63279557	Gm17384|NM_001170705	0	+
chr5	69959129	69959153	9	3	+	chr5	69948180	69964869	Guf1|NM_172711	0	+
chr5	81578904	81578929	31	2	+	chr5	81450617	82224755	Lphn3|NM_198702	0	+
chr5	82165770	82165795	13	8	+	chr5	81450617	82224755	Lphn3|NM_198702	0	+
chr5	98768951	98768976	8	2	+	chr5	98758322	99231038	1700007G11Rik|NM_001024614	0	+
chr5	103926803	103926827	20	13	+	chr5	103854210	104027380	Ptpn13|NM_011204	0	+
chr5	104186615	104186640	18	11	+	chr5	104183180	104284341	Aff1|NM_133919	0	+
chr5	104186615	104186640	18	11	+	chr5	104183591	104284341	Aff1|NM_001080798	0	+
chr5	106331227	106331250	7	2	+	chr5	106305586	106344837	Zfp326|NR_030777	0	+
chr5	106331227	106331250	7	2	+	chr5	106305586	106344837	Zfp326|NM_018759	0	+
chr5	127880467	127880490	14	2	+	chr5	127722195	128046160	Tmem132c|NM_175432	0	+
chr5	131084823	131084845	5	4	+	chr5	130924661	131316515	Caln1|NM_021371	0	+
chr5	131084823	131084845	5	4	+	chr5	130845327	131316515	Caln1|NM_181045	0	+
chr5	141893555	141893573	7	1	+	chr5	141717487	142689745	Sdk1|NM_177879	0	+
chr5	151136219	151136243	11	1	+	chr5	151062504	151300328	Fry|NM_172887	0	+
chr6	15162406	15162432	39	3	+	chr6	14851348	15391977	Foxp2|NM_053242	0	+
chr6	15162406	15162432	39	3	+	chr6	15135505	15391977	Foxp2|NM_212435	0	+
chr6	18188275	18188301	19	2	+	chr6	18120686	18272769	Cftr|NM_021050	0	+
chr6	18195024	18195046	9	1	+	chr6	18120686	18272769	Cftr|NM_021050	0	+
chr6	29275382	29275406	7	4	+	chr6	29269139	29286022	Fam71f1|NM_207258	0	+
chr6	38522768	38522794	101	20	+	chr6	38501443	38559470	Luc7l2|NM_138680	0	+
chr6	38522768	38522794	101	20	+	chr6	38501443	38559470	Luc7l2|NM_001170848	0	+
chr6	38522768	38522794	101	20	+	chr6	38501443	38557155	Luc7l2|NM_001170849	0	+
chr6	40619898	40619922	5	1	+	chr6	40578829	40719122	Mgam|NM_001171003	0	+
chr6	45360584	45360612	20	13	+	chr6	45010059	47251370	Cntnap2|NM_001004357	0	+
chr6	45547292	45547316	10	3	+	chr6	45010059	47251370	Cntnap2|NM_001004357	0	+
chr6	46143155	46143187	81	7	+	chr6	45010059	47251370	Cntnap2|NM_001004357	0	+
chr6	72306714	72306740	81	13	+	chr6	72305476	72309756	Tmem150a|NM_144916	0	+
chr6	103506551	103506574	18	4	+	chr6	103460869	103683029	Chl1|NM_007697	0	+
chr6	106295642	106295667	67	10	+	chr6	106068758	106624264	Cntn4|NM_001109751	0	+
chr6	106295642	106295667	67	10	+	chr6	105627738	106624264	Cntn4|NM_173004	0	+
chr6	106295642	106295667	67	10	+	chr6	105627738	106649299	Cntn4|NM_001109749	0	+
chr6	110629822	110629846	12	4	+	chr6	110595591	111517224	Grm7|NM_177328	0	+
chr6	125733683	125733708	12	1	+	chr6	125640436	125990146	Ano2|NM_153589	0	+
chr7	6692658	6692683	22	16	+	chr7	6683451	6919931	Usp29|NM_021323	0	+
chr7	58111208	58111234	93	33	+	chr7	57230719	58118659	Nell1|NM_001037906	0	+
chr7	66034518	66034544	16	4	+	chr7	65913571	66084796	Atp10a|NM_009728	0	+
chr7	73891606	73891629	9	1	+	chr7	73888389	73968578	Lass3|NM_001164201	0	+
chr7	98573562	98573587	15	5	+	chr7	98239295	99597756	Dlg2|NM_011807	0	+
chr7	98666889	98666913	8	2	+	chr7	98239295	99597756	Dlg2|NM_011807	0	+
chr7	99048940	99048964	17	4	+	chr7	98239295	99597756	Dlg2|NM_011807	0	+
chr7	124739423	124739447	15	7	+	chr7	124524492	124811144	Xylt1|NM_175645	0	+
chr7	127888001	127888026	25	24	+	chr7	127883070	127949054	Vwa3a|NM_177697	0	+
chr7	130132883	130132905	5	1	+	chr7	130114077	130146086	Rbbp6|NM_011247	0	+
chr7	142173628	142173671	26	3	+	chr7	141862369	142365330	Dock1|NM_001033420	0	+
chr7	147326554	147326579	13	2	+	chr7	147323462	147336685	Mtg1|NM_199301	0	+
chr8	42392830	42392857	67	16	+	chr8	42325112	42419441	Pcm1|NM_023662	0	+
chr8	47881253	47881277	7	1	+	chr8	47825098	47932812	Irf2|NM_008391	0	+
chr8	58521955	58521980	121	13	+	chr8	58419621	58604149	Glra3|NM_080438	0	+
chr8	68548955	68548979	14	1	+	chr8	68142423	68995536	March1|NM_175188	0	+
chr8	68548955	68548979	14	1	+	chr8	68141938	68995536	March1|NM_001166372	0	+
chr8	75268956	75268980	9	2	+	chr8	75247186	75282102	Sin3b|NM_009188	0	+
chr8	78414931	78414946	6	1	+	chr8	77972592	78508406	1700007B14Rik|NM_027944	0	+
chr8	78414931	78414946	6	1	+	chr8	77972592	78508406	1700007B14Rik|NM_001164235	0	+
chr8	93636181	93636207	409	21	+	chr8	93593992	93647743	Rbl2|NM_011250	0	+
chr8	109867765	109867792	26	2	+	chr8	109817369	109903417	Nfat5|NM_018823	0	+
chr8	109867765	109867792	26	2	+	chr8	109817369	109903417	Nfat5|NM_133957	0	+
chr8	109885628	109885652	71	8	+	chr8	109817369	109903417	Nfat5|NM_018823	0	+
chr8	109885628	109885652	71	8	+	chr8	109817369	109903417	Nfat5|NM_133957	0	+
chr8	111389885	111389909	7	2	+	chr8	111238543	111485536	Zfhx3|NM_007496	0	+
chr8	121976512	121976535	6	5	+	chr8	121970618	121996535	Necab2|NM_054095	0	+
chr8	122468083	122468106	6	5	+	chr8	122434751	122481457	Usp10|NM_009462	0	+
chr8	125879304	125879337	30	11	+	chr8	125856612	125893418	Spire2|NM_172287	0	+
chr8	128135885	128135917	58	16	+	chr8	128108537	128140570	4930567H12Rik|NR_015535	0	+
chr8	129719489	129719516	39	6	+	chr8	129587955	129925959	Pard3|NM_001122850	0	+
chr8	129719489	129719516	39	6	+	chr8	129587955	130136186	Pard3|NM_033620	0	+
chr9	27774043	27774069	83	6	+	chr9	27598853	28732633	Opcml|NM_177906	0	+
chr9	34716660	34716682	9	2	+	chr9	34296315	34838463	Kirrel3|NM_001190913	0	+
chr9	34716660	34716682	9	2	+	chr9	34296315	34843892	Kirrel3|NM_001190912	0	+
chr9	34716660	34716682	9	2	+	chr9	34296315	34843892	Kirrel3|NM_001190911	0	+
chr9	34716660	34716682	9	2	+	chr9	34296315	34843892	Kirrel3|NM_001190914	0	+
chr9	34716660	34716682	9	2	+	chr9	34296315	34843892	Kirrel3|NM_026324	0	+
chr9	40579184	40579208	13	3	+	chr9	40494046	40592129	9030425E11Rik|NM_133733	0	+
chr9	44440413	44440436	5	2	+	chr9	44412974	44448814	Ddx6|NM_181324	0	+
chr9	44440413	44440436	5	2	+	chr9	44412974	44448814	Ddx6|NM_001110826	0	+
chr9	44440413	44440436	5	2	+	chr9	44412974	44448814	Ddx6|NM_007841	0	+
chr9	47356374	47356399	17	2	+	chr9	47338434	47661468	Cadm1|NM_207675	0	+
chr9	47356374	47356399	17	2	+	chr9	47338434	47661468	Cadm1|NM_018770	0	+
chr9	47356374	47356399	17	2	+	chr9	47338434	47661468	Cadm1|NM_207676	0	+
chr9	47356374	47356399	17	2	+	chr9	47338434	47661468	Cadm1|NM_001025600	0	+
chr9	47356374	47356399	17	5	+	chr9	47338434	47661468	Cadm1|NM_207675	0	+
chr9	47356374	47356399	17	5	+	chr9	47338434	47661468	Cadm1|NM_018770	0	+
chr9	47356374	47356399	17	5	+	chr9	47338434	47661468	Cadm1|NM_207676	0	+
chr9	47356374	47356399	17	5	+	chr9	47338434	47661468	Cadm1|NM_001025600	0	+
chr9	65216762	65216785	8	1	+	chr9	65208866	65228184	Gm514|NM_001111145	0	+
chr9	65827796	65827819	9	4	+	chr9	65756816	65892821	Csnk1g1|NM_173185	0	+
chr9	69006609	69006636	263	39	+	chr9	68501608	69226835	Rora|NM_013646	0	+
chr9	75043045	75043069	14	1	+	chr9	74919012	75071494	Myo5a|NM_010864	0	+
chr9	75885258	75885283	21	2	+	chr9	75862783	75984157	Hmgcll1|NM_173731	0	+
chr9	86384451	86384476	14	5	+	chr9	86360760	86449413	Dopey1|NM_177208	0	+
chr9	100687181	100687204	8	2	+	chr9	100544041	100858963	Stag1|NM_009282	0	+
chr9	102808528	102808550	7	3	+	chr9	102737249	102810637	Ryk|NM_013649	0	+
chr9	102808528	102808550	7	3	+	chr9	102737249	102810637	Ryk|NM_001042607	0	+
chr9	115010936	115010961	24	7	+	chr9	114976396	115141341	Osbpl10|NM_148958	0	+
chrX	48217553	48217576	6	3	+	chrX	48194612	48245027	2610018G03Rik|NM_133729	0	+
chrX	50356784	50356808	19	3	+	chrX	50341254	50374837	Hprt|NM_013556	0	+
chrX	66704348	66704372	12	3	+	chrX	66613505	67121212	Aff2|NM_008032	0	+
chrX	81474896	81474920	17	1	+	chrX	80194208	82450389	Dmd|NM_007868	0	+
chrX	82412624	82412650	17	5	+	chrX	80194208	82450389	Dmd|NM_007868	0	+
chrX	93746064	93746089	9	2	+	chrX	93650774	93769823	Heph|NM_010417	0	+
chrX	93746064	93746089	9	2	+	chrX	93650774	93769823	Heph|NM_001159628	0	+
chrX	93746064	93746089	9	2	+	chrX	93651684	93769823	Heph|NM_001159627	0	+
chrX	97443419	97443443	8	4	+	chrX	97170944	97596099	Eda|NM_001177939	0	+
chrX	97443419	97443443	8	4	+	chrX	97170944	97596099	Eda|NM_001177938	0	+
chrX	97443419	97443443	8	4	+	chrX	97170944	97596099	Eda|NM_010099	0	+
chrX	97443419	97443443	8	4	+	chrX	97170944	97596099	Eda|NM_001177937	0	+
chrX	97443419	97443443	8	4	+	chrX	97170944	97596099	Eda|NM_001177943	0	+
chrX	97443419	97443443	8	4	+	chrX	97170944	97596099	Eda|NM_001177942	0	+
chrX	97443419	97443443	8	4	+	chrX	97170944	97596099	Eda|NM_001177941	0	+
chrX	97443419	97443443	8	4	+	chrX	97170944	97596099	Eda|NM_001177940	0	+
chrX	97443419	97443443	8	4	+	chrX	97170944	97596099	Eda|NM_001177944	0	+
chrX	97695259	97695287	40	10	+	chrX	97689629	97711464	Igbp1|NM_008784	0	+
chrX	103894123	103894148	1097	74	+	chrX	103778524	103905896	Gm5127|NM_001033541	0	+
chrX	106059865	106059889	26	3	+	chrX	106029816	106082235	2810403D21Rik|NR_015493	0	+
chrX	110423236	110423262	16	1	+	chrX	110411864	110949995	Dach2|NM_033605	0	+
chrX	110423236	110423262	16	1	+	chrX	110411864	110948700	Dach2|NM_001142570	0	+
chrX	117455803	117455830	185	74	+	chrX	117403935	118020059	Pcdh11x|NM_001081385	0	+
chrX	117823866	117823889	7	3	+	chrX	117403935	118020059	Pcdh11x|NM_001081385	0	+
chrX	126638196	126638220	22	2	+	chrX	126284277	127000369	Diap2|NM_172493	0	+
chrX	130602650	130602673	8	1	+	chrX	130593887	130621360	Cstf2|NM_133196	0	+
chrX	134669575	134669610	700	77	+	chrX	134106087	135381494	Il1rapl2|NM_030688	0	+
chrX	134895046	134895070	11	5	+	chrX	134106087	135381494	Il1rapl2|NM_030688	0	+
chrX	140071703	140071735	99	7	+	chrX	139997806	140232339	Pak3|NM_008778	0	+
chrX	140071703	140071735	99	7	+	chrX	139953133	140232339	Pak3|NM_001195048	0	+
chrX	140144370	140144388	5	1	+	chrX	140127829	140232339	Pak3|NM_001195046	0	+
chrX	140144370	140144388	5	1	+	chrX	140127829	140232339	Pak3|NM_001195047	0	+
chrX	140144370	140144388	5	1	+	chrX	139997806	140232339	Pak3|NM_008778	0	+
chrX	140144370	140144388	5	1	+	chrX	140100287	140232339	Pak3|NM_001195049	0	+
chrX	140144370	140144388	5	1	+	chrX	139953133	140232339	Pak3|NM_001195048	0	+
chrX	141498289	141498313	12	2	+	chrX	141123449	141556953	Zcchc16|NM_001033795	0	+