chr1	37929113	37929138	7	8	+	chr1	37929050	37933143	Lipt1|NM_001037918	0	+
chr1	57463499	57463578	19	5	+	chr1	57463391	57472802	9430016H08Rik|NM_001081181	0	+
chr1	75192796	75192824	5	2	+	chr1	75188708	75195960	Ankzf1|NM_026187	0	+
chr1	129999922	129999975	5	1	+	chr1	129999882	130134312	R3hdm1|NM_181750	0	+
chr1	173051844	173051881	6	1	+	chr1	173051791	173057098	1700009P17Rik|NM_001081275	0	+
chr1	173341905	173341933	87	5	+	chr1	173341811	173348873	Usf1|NM_009480	0	+
chr1	24017637	24017663	9	2	-	chr1	24017596	24107180	Fam135a|NM_026604	0	-
chr1	24018582	24018610	45	5	-	chr1	24017596	24107180	Fam135a|NM_026604	0	-
chr1	38186402	38186452	9	4	-	chr1	38109630	38186507	Rev1|NM_019570	0	-
chr1	58476672	58476704	60	25	-	chr1	58468831	58480932	Clk1|NR_027853	0	-
chr1	58476672	58476704	60	25	-	chr1	58468831	58480932	Clk1|NR_027854	0	-
chr1	58476672	58476704	60	25	-	chr1	58468831	58480932	Clk1|NM_001042634	0	-
chr1	59126625	59126672	33	7	-	chr1	59107349	59151744	Als2cr11|NM_175200	0	-
chr1	72904946	72904971	7	3	-	chr1	72904638	72921439	Igfbp5|NM_010518	0	-
chr1	88247745	88247781	450	135	-	chr1	88247744	88247860	Snora75|NR_028478	0	-
chr1	88247745	88247781	450	135	-	chr1	88241293	88256030	Ncl|NM_010880	0	-
chr1	95601988	95602033	14	1	-	chr1	95601967	95651415	Thap4|NM_025920	0	-
chr1	99558457	99558482	6	1	-	chr1	99540478	99558595	D1Ertd622e|NM_133825	0	-
chr1	99928081	99928106	8	6	-	chr1	99927699	99944370	B230216N24Rik|NR_037993	0	-
chr1	99928081	99928106	8	6	-	chr1	99717670	99992209	Pam|NM_013626	0	-
chr1	133141689	133141728	19	3	-	chr1	133072986	133141755	Rassf5|NM_018750	0	-
chr1	140554443	140554494	23	2	-	chr1	140536671	140578652	Gm5833|NR_040304	0	-
chr1	141707303	141707357	10	1	-	chr1	141706868	141755276	Cfhr2|NM_001025575	0	-
chr1	151923805	151923826	7	3	-	chr1	151923790	151946896	7530420F21Rik|NR_015466	0	-
chr1	154233703	154233805	20	2	-	chr1	154217865	154233812	Tsen15|NM_025677	0	-
chr1	155646980	155647012	11	4	-	chr1	155626516	155691271	Rgsl1|NM_001243223	0	-
chr1	162949800	162949824	10	1	-	chr1	162947886	162964390	Zbtb37|NM_173424	0	-
chr1	165316060	165316085	27	2	-	chr1	165315039	165333772	Gorab|NM_178883	0	-
chr1	166078838	166078890	16	1	-	chr1	166078706	166082348	Gm16548|NR_037987	0	-
chr1	167106160	167106183	54	22	-	chr1	167104471	167124564	Sft2d2|NM_145512	0	-
chr1	178204872	178204950	22	7	-	chr1	177892436	178205443	Pld5|NM_176916	0	-
chr1	189832469	189832497	14	2	-	chr1	189830454	189832869	9330162B11Rik|NR_038007	0	-
chr1	194933833	194933859	8	2	-	chr1	194930596	194956445	Diexf|NM_145415	0	-
chr10	23571367	23571393	22	17	+	chr10	23571267	23589649	Vnn3|NM_011979	0	+
chr10	43621828	43621852	7	10	+	chr10	43621612	43667668	Rtn4ip1|NM_130892	0	+
chr10	3557899	3557936	16	2	-	chr10	3308331	3557940	Oprm1|NM_001039652	0	-
chr10	24497721	24497780	42	5	-	chr10	24493619	24556001	Enpp3|NM_134005	0	-
chr10	31134027	31134080	16	1	-	chr10	31133531	31134241	Gm3258|NM_011509	0	-
chr10	31134027	31134080	16	1	-	chr10	31052185	31165727	Tpd52l1|NM_009413	0	-
chr10	31329122	31329150	13	2	-	chr10	31221692	31329531	Rnf217|NM_001146349	0	-
chr10	42198142	42198199	10	1	-	chr10	42032390	42198371	Lace1|NM_145743	0	-
chr10	53099560	53099591	24	3	-	chr10	52997886	53099657	Gm9766|NM_001204983	0	-
chr10	53366865	53366894	452	63	-	chr10	53352951	53470715	Fam184a|NM_001081428	0	-
chr10	53654788	53654819	11	8	-	chr10	53625838	53795602	Man1a|NM_008548	0	-
chr10	60561498	60561530	16	2	-	chr10	60561389	60610413	Sgpl1|NM_009163	0	-
chr10	60561715	60561765	29	3	-	chr10	60561389	60610413	Sgpl1|NM_009163	0	-
chr10	61650454	61650480	13	2	-	chr10	61648143	61693966	Tspan15|NM_197996	0	-
chr10	61656649	61656671	6	1	-	chr10	61648143	61693966	Tspan15|NM_197996	0	-
chr10	70632763	70632799	5	3	-	chr10	70631484	70644788	C730027H18Rik|NR_038040	0	-
chr10	79003430	79003453	18	5	-	chr10	79002989	79017836	Mier2|NM_027422	0	-
chr10	79869446	79869472	6	4	-	chr10	79865741	79869566	Uqcr11|NM_025650	0	-
chr10	80204818	80204903	14	1	-	chr10	80169722	80204956	Ap3d1|NM_007460	0	-
chr10	84561772	84561824	6	1	-	chr10	84559763	84565240	Fhl4|NM_010214	0	-
chr10	86306330	86306354	10	1	-	chr10	86303954	86470687	Stab2|NM_138673	0	-
chr10	86329494	86329522	524	46	-	chr10	86303954	86470687	Stab2|NM_138673	0	-
chr10	86360735	86360786	13	1	-	chr10	86303954	86470687	Stab2|NM_138673	0	-
chr10	88067785	88067832	13	1	-	chr10	87981027	88067897	Mybpc1|NM_175418	0	-
chr10	88193772	88193801	209	77	-	chr10	88192285	88193846	Gm4925|NM_001037166	0	-
chr10	93352887	93352925	105	7	-	chr10	93321234	93353947	Metap2|NM_019648	0	-
chr10	119578710	119578770	30	2	-	chr10	119578709	119638593	Irak3|NM_028679	0	-
chr11	17092998	17093019	19	9	+	chr11	17059300	17100383	Ppp3r1|NM_024459	0	+
chr11	22872406	22872436	5	1	+	chr11	22872004	22876496	Zrsr1|NM_011663	0	+
chr11	34301266	34301299	206	11	+	chr11	34214821	34322640	Fam196b|NM_001025382	0	+
chr11	40547358	40547383	15	2	+	chr11	40547143	40553549	Nudcd2|NM_026023	0	+
chr11	49064140	49064164	20	2	+	chr11	49057692	49076526	Mgat1|NM_001110148	0	+
chr11	49064140	49064164	20	2	+	chr11	49057692	49076526	Mgat1|NM_010794	0	+
chr11	49064140	49064164	20	2	+	chr11	49064053	49076526	Mgat1|NM_001110150	0	+
chr11	49064140	49064164	20	2	+	chr11	49060978	49076526	Mgat1|NM_001110149	0	+
chr11	72861368	72861411	10	2	+	chr11	72861368	72897081	1200014J11Rik|NM_025818	0	+
chr11	74644575	74644652	13	4	+	chr11	74644425	74659227	Mnt|NM_010813	0	+
chr11	74644575	74644652	13	1	+	chr11	74644425	74659227	Mnt|NM_010813	0	+
chr11	77992489	77992513	23	2	+	chr11	77992267	77994274	Tlcd1|NM_026708	0	+
chr11	95703985	95704011	52	3	+	chr11	95703608	95707045	Gngt2|NM_023121	0	+
chr11	95703985	95704011	52	3	+	chr11	95703981	95707045	Gngt2|NM_001038664	0	+
chr11	20608726	20608746	13	13	-	chr11	20585087	20641487	Aftph|NM_181411	0	-
chr11	20641345	20641398	5	3	-	chr11	20585087	20641487	Aftph|NM_181411	0	-
chr11	33379154	33379181	9	2	-	chr11	33111793	33413746	Ranbp17|NM_023146	0	-
chr11	51449254	51449298	24	3	-	chr11	51437174	51449398	Rmnd5b|NM_025346	0	-
chr11	70467945	70467996	7	1	-	chr11	70465348	70468152	Pfn1|NM_011072	0	-
chr11	73220666	73220694	16	3	-	chr11	73218951	73223325	Olfr75-ps1|NR_002859	0	-
chr11	73220666	73220694	16	3	-	chr11	73218951	73223360	Olfr75-ps1|NR_033528	0	-
chr11	75259197	75259270	18	1	-	chr11	75254444	75268219	Wdr81|NM_138950	0	-
chr11	75259197	75259270	18	1	-	chr11	75254444	75268219	Wdr81|NM_138950	0	-
chr11	75267784	75267807	6	1	-	chr11	75254444	75268219	Wdr81|NM_138950	0	-
chr11	76916310	76916348	7	2	-	chr11	76903416	77002470	Efcab5|NM_176965	0	-
chr11	78364190	78364221	17	2	-	chr11	78355318	78364237	Tmem97|NM_133706	0	-
chr11	78510257	78510288	15	1	-	chr11	78380669	78510927	Nlk|NM_008702	0	-
chr11	86543830	86543902	18	4	-	chr11	86508154	86570994	Cltc|NM_001003908	0	-
chr11	88156243	88156298	6	1	-	chr11	88152883	88579543	Msi2|NM_054043	0	-
chr11	88899384	88899444	15	3	-	chr11	88898895	88922062	Dgke|NM_019505	0	-
chr11	100247660	100247699	26	5	-	chr11	100230169	100259104	Jup|NM_010593	0	-
chr11	101025551	101025574	6	1	-	chr11	101023992	101032616	Plekhh3|NM_146030	0	-
chr11	102327673	102327697	42	5	-	chr11	102314610	102331197	Itga2b|NM_010575	0	-
chr11	106029685	106029747	8	1	-	chr11	106024649	106054862	Strada|NM_028126	0	-
chr11	112906316	112906348	33	9	-	chr11	112905219	113063152	2610035D17Rik|NR_015556	0	-
chr11	116029184	116029236	18	2	-	chr11	116003598	116029492	Fbf1|NM_172571	0	-
chr12	25393154	25393176	13	4	+	chr12	25393118	25399011	Rrm2|NM_009104	0	+
chr12	66177088	66177170	12	1	+	chr12	66176592	66233045	Fancm|NM_178912	0	+
chr12	96930618	96930641	17	12	+	chr12	96930435	97023423	Flrt2|NM_201518	0	+
chr12	113232682	113232706	45	38	+	chr12	113209769	113307065	Tdrd9|NM_029056	0	+
chr12	21329569	21329601	27	2	-	chr12	21329369	21379452	Adam17|NM_009615	0	-
chr12	27128034	27128096	12	1	-	chr12	27127607	27141317	Rsad2|NM_021384	0	-
chr12	70697649	70697692	12	2	-	chr12	70684747	70782839	Sos2|NM_001135559	0	-
chr12	92237202	92237229	8	2	-	chr12	92236931	92622849	4930534B04Rik|NM_181815	0	-
chr12	92825228	92825249	8	1	-	chr12	92793701	92828089	Gtf2a1|NM_031391	0	-
chr12	92825228	92825249	8	1	-	chr12	92793701	92828927	Gtf2a1|NM_175335	0	-
chr12	105960319	105960352	9	1	-	chr12	105925951	105990162	Dicer1|NM_148948	0	-
chr12	106923026	106923061	6	2	-	chr12	106851748	106923451	Atg2b|NM_029654	0	-
chr13	9121356	9121379	11	1	+	chr13	9093150	9172336	Larp4b|NM_172585	0	+
chr13	31650043	31650093	10	1	+	chr13	31650038	31652843	Foxq1|NM_008239	0	+
chr13	41103400	41103423	16	1	+	chr13	41096378	41108402	Pak1ip1|NM_026550	0	+
chr13	67006517	67006543	10	1	+	chr13	67006350	67010102	Gm10767|NM_001177750	0	+
chr13	73468471	73468497	15	6	+	chr13	73468456	73469626	Mrpl36|NM_053163	0	+
chr13	94078166	94078201	23	2	+	chr13	94074449	94126785	Homer1|NM_011982	0	+
chr13	94078166	94078201	23	2	+	chr13	94077988	94174917	Homer1|NM_152134	0	+
chr13	94078166	94078201	23	2	+	chr13	94074449	94174917	Homer1|NM_147176	0	+
chr13	8991256	8991279	11	2	-	chr13	8971723	8995258	Gtpbp4|NM_027000	0	-
chr13	11816573	11816620	32	4	-	chr13	11645369	12199212	Ryr2|NM_023868	0	-
chr13	29045092	29045137	11	3	-	chr13	29042598	29045551	Sox4|NM_009238	0	-
chr13	34719729	34719755	32	24	-	chr13	34719709	34744550	1300014I06Rik|NM_025831	0	-
chr13	38726901	38726937	114	6	-	chr13	38694574	38726978	Muted|NM_139063	0	-
chr13	39052567	39052608	5	1	-	chr13	39024008	39052744	Slc35b3|NM_001170431	0	-
chr13	68700670	68700693	6	4	-	chr13	68699656	68720998	Mtrr|NM_172480	0	-
chr13	70728552	70728575	32	8	-	chr13	70727566	70776512	BC018507|NM_144837	0	-
chr13	94269248	94269285	5	1	-	chr13	94200051	94269763	Jmy|NM_021310	0	-
chr14	33135281	33135304	16	7	+	chr14	33135204	33161006	Ogdhl|NM_001081130	0	+
chr14	34736872	34736915	7	1	+	chr14	34736772	34748468	Gdf10|NM_145741	0	+
chr14	56339338	56339363	5	2	-	chr14	56334713	56341013	Rabggta|NM_019519	0	-
chr14	60663155	60663202	15	7	-	chr14	60266577	60705671	Atp8a2|NM_015803	0	-
chr14	69860123	69860186	14	2	-	chr14	69859907	69903160	Slc25a37|NM_026331	0	-
chr14	99483294	99483337	11	2	-	chr14	99475852	99498989	Dis3|NM_028315	0	-
chr15	34012669	34012715	11	1	+	chr15	34012473	34072140	Mtdh|NM_026002	0	+
chr15	81296766	81296812	7	2	+	chr15	81296745	81306799	Rbx1|NM_019712	0	+
chr15	3972380	3972406	6	1	-	chr15	3970110	3977406	BC037032|NR_028266	0	-
chr15	8600975	8601037	24	4	-	chr15	8584123	8660807	Slc1a3|NM_148938	0	-
chr15	56525646	56525690	11	3	-	chr15	56497181	56526101	Has2|NM_008216	0	-
chr15	64752715	64752742	7	1	-	chr15	64530596	64753858	Adcy8|NM_009623	0	-
chr15	72637167	72637193	13	3	-	chr15	72636029	72640754	Peg13|NR_002864	0	-
chr15	72637167	72637193	13	3	-	chr15	72420049	72886242	Trappc9|NM_029640	0	-
chr15	72637167	72637193	13	3	-	chr15	72420049	72891634	Trappc9|NM_180662	0	-
chr15	72637167	72637193	13	3	-	chr15	72629953	72891634	Trappc9|NM_001164641	0	-
chr15	76465062	76465093	14	4	-	chr15	76456666	76470359	Tonsl|NM_183091	0	-
chr15	83188515	83188558	11	1	-	chr15	83184276	83197727	1700001L05Rik|NR_027980	0	-
chr15	85989532	85989589	9	1	-	chr15	85969530	86016571	Cerk|NM_145475	0	-
chr15	89412993	89413036	5	1	-	chr15	89412957	89422354	Rabl2|NM_026817	0	-
chr15	98428538	98428562	20	2	-	chr15	98420420	98438064	Adcy6|NM_007405	0	-
chr15	102381956	102381982	19	9	-	chr15	102367074	102455852	Atf7|NM_146065	0	-
chr15	103187380	103187421	14	1	-	chr15	103174717	103197179	Itga5|NM_010577	0	-
chr16	17803502	17803559	11	1	+	chr16	17797374	17808380	Scarf2|NM_153790	0	+
chr16	32626701	32626738	26	6	+	chr16	32608981	32632880	Tfrc|NM_011638	0	+
chr16	38902600	38902646	12	2	+	chr16	38902457	39027270	Igsf11|NM_170599	0	+
chr16	58670441	58670468	81	14	+	chr16	58670320	58680502	Cpox|NM_007757	0	+
chr16	4675769	4675792	5	1	-	chr16	4626883	4679720	Coro7|NM_030205	0	-
chr16	17124196	17124221	13	11	-	chr16	17124153	17124235	Mir130b|NR_029659	0	-
chr16	17124196	17124221	13	11	-	chr16	17113490	17125199	2610318N02Rik|NM_183287	0	-
chr16	20709985	20710026	19	1	-	chr16	20703038	20716709	Clcn2|NM_009900	0	-
chr16	28600087	28600122	6	1	-	chr16	28600020	28600129	Mir690|NR_030463	0	-
chr16	28600087	28600122	6	1	-	chr16	28160183	28753288	Fgf12|NM_010199	0	-
chr16	29958046	29958070	5	2	-	chr16	29958012	29979210	Gm1968|NR_037689	0	-
chr16	43863021	43863044	25	2	-	chr16	43861525	43889789	Qtrtd1|NM_029128	0	-
chr16	91030728	91030752	9	2	-	chr16	91014281	91044624	Gcfc1|NM_026110	0	-
chr16	91036163	91036195	5	2	-	chr16	91014281	91044624	Gcfc1|NM_026110	0	-
chr16	91686559	91686608	11	1	-	chr16	91679509	91688973	Donson|NM_021720	0	-
chr17	21397509	21397576	16	4	+	chr17	21397390	21399827	Vmn1r235|NM_134199	0	+
chr17	24702842	24702870	5	2	+	chr17	24686894	24733459	Pkd1|NM_013630	0	+
chr17	29090245	29090307	8	1	+	chr17	29090160	29104882	Kctd20|NM_025888	0	+
chr17	34987562	34987597	26	10	+	chr17	34987335	34993317	Rdbp|NM_001045864	0	+
chr17	34987562	34987597	26	10	+	chr17	34987335	34993317	Rdbp|NM_138580	0	+
chr17	34987562	34987597	26	10	+	chr17	34987335	34993317	Rdbp|NM_001045863	0	+
chr17	93598774	93598816	50	5	+	chr17	93598761	93604829	Adcyap1|NM_009625	0	+
chr17	24342962	24343003	19	1	-	chr17	24340790	24346332	Ntn3|NM_010947	0	-
chr17	24551350	24551386	18	2	-	chr17	24546425	24551458	D330041H03Rik|NR_033554	0	-
chr17	26021672	26021727	16	2	-	chr17	26019058	26056659	Rab40c|NM_139154	0	-
chr17	26071764	26071797	11	3	-	chr17	26063368	26078907	Pigq|NM_011822	0	-
chr17	33379275	33379301	53	7	-	chr17	33376451	33392090	Zfp955a|NM_029952	0	-
chr17	34421384	34421414	732	467	-	chr17	34419695	34424716	H2-Aa|NM_010378	0	-
chr17	36326297	36326329	14	1	-	chr17	36322515	36327096	H2-T3|NM_008208	0	-
chr17	56346293	56346332	11	1	-	chr17	56326104	56358312	Dpp9|NM_172624	0	-
chr17	56586805	56586827	8	1	-	chr17	56551848	56615903	Ptprs|NM_011218	0	-
chr17	66441239	66441269	11	1	-	chr17	66428134	66450831	Ndufv2|NM_028388	0	-
chr17	80429149	80429213	6	1	-	chr17	80428826	80461674	Hnrpll|NM_144802	0	-
chr17	80771369	80771405	12	10	-	chr17	80771196	80772882	Gm10190|NR_028385	0	-
chr17	88197251	88197283	7	1	-	chr17	88145160	88197334	Kcnk12|NM_199251	0	-
chr18	34918619	34918703	6	1	+	chr18	34918559	34933414	Fam53c|NM_175104	0	+
chr18	75527307	75527369	15	3	+	chr18	75527018	75555588	Smad7|NM_001042660	0	+
chr18	12140970	12141013	32	20	-	chr18	12140447	12279962	6030446N20Rik|NM_178801	0	-
chr18	14004137	14004164	12	1	-	chr18	13845522	14131242	Zfp521|NM_145492	0	-
chr18	24171317	24171340	23	2	-	chr18	24170767	24179272	Zfp191|NM_021559	0	-
chr18	38999665	38999700	5	2	-	chr18	38998326	39078353	Fgf1|NM_010197	0	-
chr18	45844679	45844740	13	1	-	chr18	45843140	46204914	A330093E20Rik|NR_040342	0	-
chr18	45844679	45844740	13	1	-	chr18	45843140	46204914	A330093E20Rik|NR_040342	0	-
chr18	73837370	73837413	12	1	-	chr18	73798666	73863395	Smad4|NM_008540	0	-
chr18	80339489	80339513	13	2	-	chr18	80323873	80348221	Adnp2|NM_175028	0	-
chr18	82575518	82575551	14	1	-	chr18	82561887	82576169	Galr1|NM_008082	0	-
chr19	4003563	4003588	77	13	+	chr19	4003384	4007005	Doc2g|NM_021791	0	+
chr19	9041550	9041613	12	1	+	chr19	9041530	9052670	Eef1g|NM_026007	0	+
chr19	9041550	9041613	12	2	+	chr19	9041530	9052670	Eef1g|NM_026007	0	+
chr19	41625940	41625972	17	5	+	chr19	41624128	41634271	Lcor|NM_172154	0	+
chr19	41626708	41626750	6	1	+	chr19	41624128	41634271	Lcor|NM_172154	0	+
chr19	54120501	54120556	9	1	+	chr19	54119671	54123472	Adra2a|NM_007417	0	+
chr19	4839224	4839261	8	2	-	chr19	4825365	4839322	Ccs|NM_016892	0	-
chr19	5843114	5843143	7	1	-	chr19	5842301	5845478	Neat1|NR_003513	0	-
chr19	5907138	5907175	17	2	-	chr19	5897134	5912866	Dpf2|NM_011262	0	-
chr19	12660685	12660737	7	1	-	chr19	12660357	12671056	A330040F15Rik|NR_015503	0	-
chr19	12670952	12671000	6	2	-	chr19	12660357	12671056	A330040F15Rik|NR_015503	0	-
chr19	38199546	38199590	6	1	-	chr19	38191109	38199811	Rbp4|NM_001159487	0	-
chr19	42024284	42024306	16	3	-	chr19	42018196	42055626	Mms19|NM_028152	0	-
chr19	47812029	47812055	8	4	-	chr19	47811346	47911851	Wdr96|NM_027559	0	-
chr19	53516852	53516879	21	7	-	chr19	53515701	53539286	5830416P10Rik|NR_028427	0	-
chr19	58311354	58311396	5	1	-	chr19	58311181	58528956	Gfra1|NM_010279	0	-
chr2	25036614	25036636	9	1	+	chr2	25036277	25038852	Nrarp|NM_025980	0	+
chr2	25413455	25413488	13	1	+	chr2	25413419	25417602	Edf1|NM_021519	0	+
chr2	74536102	74536125	39	28	+	chr2	74535819	74538265	Hoxd9|NM_013555	0	+
chr2	78140422	78140475	34	2	+	chr2	78077703	78142387	Gm14461|NM_177843	0	+
chr2	91097595	91097661	5	1	+	chr2	91096969	91104836	Pacsin3|NM_030880	0	+
chr2	91097595	91097661	5	1	+	chr2	91097485	91104836	Pacsin3|NM_028733	0	+
chr2	127164489	127164513	12	1	+	chr2	127164374	127183387	Astl|NM_172539	0	+
chr2	145612057	145612079	7	4	+	chr2	145611851	145713352	Rin2|NM_028724	0	+
chr2	158201478	158201531	7	2	+	chr2	158201373	158211881	Snhg11|NM_175692	0	+
chr2	177877011	177877041	18	1	+	chr2	177853679	178073197	Phactr3|NM_001177789	0	+
chr2	177877011	177877041	18	1	+	chr2	177853679	178073197	Phactr3|NM_001177790	0	+
chr2	177877011	177877041	18	1	+	chr2	177876637	178073197	Phactr3|NM_028806	0	+
chr2	181531438	181531502	6	1	+	chr2	181498036	181562480	Myt1|NM_001171615	0	+
chr2	181531438	181531502	6	1	+	chr2	181501733	181562480	Myt1|NM_008665	0	+
chr2	181531438	181531502	6	1	+	chr2	181531011	181562480	Myt1|NM_001171680	0	+
chr2	181531438	181531502	6	1	+	chr2	181501733	181562480	Myt1|NM_001171616	0	+
chr2	25183969	25184003	75	10	-	chr2	25182969	25188091	AA543186|NR_027448	0	-
chr2	29101153	29101188	8	1	-	chr2	29100635	29108513	6530402F18Rik|NR_029460	0	-
chr2	29101153	29101188	8	1	-	chr2	29050340	29103560	Ntng2|NM_133500	0	-
chr2	29101153	29101188	8	1	-	chr2	29050340	29103560	Ntng2|NM_133501	0	-
chr2	29979860	29979895	7	6	-	chr2	29952802	29979974	Zer1|NM_178694	0	-
chr2	34817254	34817280	5	1	-	chr2	34798777	34817292	Traf1|NM_009421	0	-
chr2	80393346	80393379	5	2	-	chr2	80341451	80421122	Nckap1|NM_016965	0	-
chr2	84551420	84551444	5	1	-	chr2	84528076	84555321	Zdhhc5|NM_144887	0	-
chr2	85036141	85036178	132	9	-	chr2	85028227	85036856	Lrrc55|NM_001033346	0	-
chr2	90757976	90758024	21	2	-	chr2	90750869	90758207	Ptpmt1|NM_025576	0	-
chr2	102240814	102240924	14	1	-	chr2	102140275	102241057	Trim44|NM_020267	0	-
chr2	104916793	104916815	15	3	-	chr2	104916694	104966667	AI314831|NR_015462	0	-
chr2	114480620	114480641	5	1	-	chr2	114342153	114480664	Atpbd4|NM_025675	0	-
chr2	119096894	119096951	14	3	-	chr2	119094936	119096962	Rhov|NM_145530	0	-
chr2	119488495	119488523	7	2	-	chr2	119481186	119488534	Ndufaf1|NM_027175	0	-
chr2	128769730	128769753	10	1	-	chr2	128752003	128769756	Zc3h8|NM_020594	0	-
chr2	129624852	129624876	8	1	-	chr2	129624104	129627195	4932416H05Rik|NR_029452	0	-
chr2	131128233	131128257	17	1	-	chr2	131124223	131178628	Rnf24|NM_178607	0	-
chr2	140088438	140088461	6	2	-	chr2	140055593	140215446	Sel1l2|NM_001033296	0	-
chr2	180068983	180069008	68	13	-	chr2	180059792	180069384	Gata5|NM_008093	0	-
chr3	32607668	32607702	8	2	+	chr3	32607467	32625893	Actl6a|NM_019673	0	+
chr3	69121379	69121427	6	2	+	chr3	69120839	69359318	Ppm1l|NM_178726	0	+
chr3	103718360	103718390	35	11	+	chr3	103718042	103770543	Rsbn1|NM_172684	0	+
chr3	106906983	106907031	9	1	+	chr3	106904484	106909797	Kcna2|NM_008417	0	+
chr3	7573620	7573659	5	2	-	chr3	7572076	7613427	Il7|NM_008371	0	-
chr3	41292638	41292660	5	4	-	chr3	41291602	41297121	C430002E04Rik|NR_040385	0	-
chr3	72755551	72755580	19	2	-	chr3	72692481	72770788	Sis|NM_001081137	0	-
chr3	94863610	94863634	5	2	-	chr3	94863519	94910780	Pip5k1a|NM_008847	0	-
chr3	96001483	96001508	6	2	-	chr3	96000510	96001509	Bola1|NM_026975	0	-
chr3	101639876	101639921	7	1	-	chr3	101616998	101640146	Mab21l3|NM_172295	0	-
chr3	101662657	101662688	7	2	-	chr3	101659693	101728376	Slc22a15|NM_001039371	0	-
chr3	107275068	107275096	32	2	-	chr3	107270465	107320936	Slc6a17|NM_172271	0	-
chr3	108596236	108596275	6	1	-	chr3	108596097	108643420	Stxbp3a|NM_011504	0	-
chr4	24424044	24424076	17	1	+	chr4	24423608	24530095	Mms22l|NM_199467	0	+
chr4	41517011	41517032	12	2	+	chr4	41516826	41585191	Dnaic1|NM_175138	0	+
chr4	108908413	108908460	6	1	+	chr4	108908236	108926853	Calr4|NM_001033226	0	+
chr4	114679319	114679362	10	1	+	chr4	114672722	114715803	Stil|NM_009185	0	+
chr4	114684398	114684429	12	1	+	chr4	114672722	114715803	Stil|NM_009185	0	+
chr4	133658540	133658562	10	3	+	chr4	133658513	133682693	Ubxn11|NM_026257	0	+
chr4	138331680	138331704	11	5	+	chr4	138331649	138338058	Pla2g2d|NM_011109	0	+
chr4	14736984	14737011	32	5	-	chr4	14736651	14753734	Otud6b|NM_152812	0	-
chr4	48471518	48471551	9	1	-	chr4	48443827	48486294	Tex10|NM_172304	0	-
chr4	58013156	58013196	20	1	-	chr4	57996900	58021996	Txndc8|NM_026132	0	-
chr4	59784342	59784396	196	31	-	chr4	59782518	59796727	1110054O05Rik|NM_001013577	0	-
chr4	73360963	73361004	5	1	-	chr4	73360482	73436506	Rasef|NM_001017427	0	-
chr4	82447153	82447201	11	2	-	chr4	82444641	82505565	Zdhhc21|NM_026647	0	-
chr4	82448944	82448970	6	1	-	chr4	82444641	82505565	Zdhhc21|NM_026647	0	-
chr4	97235127	97235157	11	7	-	chr4	97234565	97251282	E130114P18Rik|NR_015513	0	-
chr4	102745401	102745437	17	1	-	chr4	102710669	102786904	Wdr78|NM_146254	0	-
chr4	108251815	108251848	31	10	-	chr4	108237471	108251941	Prpf38a|NM_172697	0	-
chr4	126024007	126024028	8	3	-	chr4	126017921	126106786	Eif2c3|NM_153402	0	-
chr4	132066248	132066298	11	2	-	chr4	132048721	132066371	Sesn2|NM_144907	0	-
chr4	141049327	141049356	11	2	-	chr4	141023804	141094512	Spen|NM_019763	0	-
chr4	153532115	153532170	6	2	-	chr4	153531594	153534793	Tprgl|NM_026388	0	-
chr4	153532115	153532170	6	1	-	chr4	153531594	153534793	Tprgl|NM_026388	0	-
chr5	43907013	43907036	6	2	+	chr5	43906807	44007825	C1qtnf7|NM_001135172	0	+
chr5	53187335	53187360	19	3	+	chr5	53174305	53211004	Zcchc4|NM_030185	0	+
chr5	53225605	53225646	6	2	+	chr5	53225373	53257973	Anapc4|NM_024213	0	+
chr5	64287678	64287730	7	2	+	chr5	64203733	64290858	0610040J01Rik|NM_029554	0	+
chr5	107860709	107860735	15	1	+	chr5	107860567	107864058	Lpcat2b|NM_027599	0	+
chr5	138670935	138670977	14	2	+	chr5	138667131	138693103	BC055004|NM_001013773	0	+
chr5	24859209	24859230	6	1	-	chr5	24777611	25004601	Mll3|NM_001081383	0	-
chr5	30848178	30848208	18	1	-	chr5	30787956	30848209	Cib4|NM_028483	0	-
chr5	33972086	33972134	14	4	-	chr5	33943001	33972284	Fam53a|NM_178390	0	-
chr5	38591553	38591602	5	1	-	chr5	38591282	38611667	Zbtb49|NM_029162	0	-
chr5	42235498	42235529	10	1	-	chr5	42178777	42235554	Bod1l|NM_001081422	0	-
chr5	100463298	100463333	6	1	-	chr5	100462597	100468241	Hnrpdl|NM_016690	0	-
chr5	109083374	109083422	38	7	-	chr5	109076062	109089788	Dgkq|NM_199011	0	-
chr5	112769025	112769058	5	1	-	chr5	112766410	112772060	Srrd|NM_027323	0	-
chr5	112769025	112769058	5	1	-	chr5	112766410	112772060	Srrd|NM_027323	0	-
chr5	120990660	120990688	6	2	-	chr5	120984165	121038622	Tpcn1|NM_145853	0	-
chr5	122084793	122084852	7	1	-	chr5	122071037	122110519	Acad10|NM_028037	0	-
chr5	124701956	124701996	6	1	-	chr5	124700967	124778460	Mphosph9|NM_001081323	0	-
chr5	128080925	128080968	14	1	-	chr5	128076035	128097762	Slc15a4|NM_133895	0	-
chr5	138715366	138715402	8	1	-	chr5	138714887	138721165	Gpc2|NM_172412	0	-
chr6	58546760	58546839	13	2	+	chr6	58546665	58642445	Abcg2|NM_011920	0	+
chr6	59158985	59159010	16	2	+	chr6	59158863	59162027	Tigd2|NM_001081145	0	+
chr6	83058761	83058794	50	3	+	chr6	83051509	83059115	Ccdc142|NM_001081266	0	+
chr6	113426484	113426507	6	4	+	chr6	113421448	113433132	Il17rc|NM_134159	0	+
chr6	113433759	113433813	49	6	+	chr6	113433562	113443332	Creld1|NM_133930	0	+
chr6	8457304	8457358	73	7	-	chr6	8457058	8459161	A430035B10Rik|NR_040452	0	-
chr6	8458763	8458804	19	2	-	chr6	8457058	8459161	A430035B10Rik|NR_040452	0	-
chr6	21802417	21802461	9	1	-	chr6	21721394	21802515	Tspan12|NM_173007	0	-
chr6	32538023	32538053	6	1	-	chr6	32094558	32538192	Plxna4|NM_175750	0	-
chr6	42629207	42629247	49	14	-	chr6	42622545	42643058	Fam115a|NM_029930	0	-
chr6	52176636	52176663	15	2	-	chr6	52174052	52177369	Hoxa9|NM_010456	0	-
chr6	57639802	57639862	11	1	-	chr6	57634732	57642072	Pigy|NM_025574	0	-
chr6	71852881	71852902	5	1	-	chr6	71830631	71858756	Ptcd3|NM_027275	0	-
chr6	115791414	115791451	34	27	-	chr6	115790714	115803359	Mbd4|NM_010774	0	-
chr6	118367440	118367471	60	7	-	chr6	118333398	118369435	Bms1|NM_194339	0	-
chr6	118473292	118473334	11	1	-	chr6	118452581	118512274	Ankrd26|NM_001081112	0	-
chr6	118482298	118482323	20	2	-	chr6	118452581	118512274	Ankrd26|NM_001081112	0	-
chr6	126688754	126688774	5	3	-	chr6	126658346	126690692	Kcna6|NM_013568	0	-
chr6	126689333	126689383	10	2	-	chr6	126658346	126690692	Kcna6|NM_013568	0	-
chr7	4289361	4289399	19	3	+	chr7	4289325	4296766	Ncr1|NM_010746	0	+
chr7	29600162	29600197	146	69	+	chr7	29595908	29607285	Hnrnpl|NM_177301	0	+
chr7	70794514	70794538	14	1	+	chr7	70589657	70903913	Otud7a|NM_130880	0	+
chr7	104845165	104845315	159	24	+	chr7	104845166	104869303	Clns1a|NM_023671	0	+
chr7	110699570	110699596	25	18	+	chr7	110698881	110704018	Olfr613|NM_147100	0	+
chr7	134732290	134732316	5	1	+	chr7	134732211	134747119	Rnf40|NM_172281	0	+
chr7	4101251	4101317	7	1	-	chr7	4099784	4101474	Leng9|NM_175529	0	-
chr7	4349297	4349324	7	1	-	chr7	4320314	4349346	Gp6|NM_001163014	0	-
chr7	13390784	13390833	66	12	-	chr7	13389126	13404209	Zfp329|NM_026046	0	-
chr7	29985260	29985287	12	1	-	chr7	29966550	29999052	Catsperg1|NM_001164658	0	-
chr7	35841508	35841583	15	1	-	chr7	35831440	35841585	Cebpg|NM_009884	0	-
chr7	48648695	48648734	7	1	-	chr7	48628299	48648749	AI987944|NM_001199330	0	-
chr7	52631832	52631861	5	1	-	chr7	52631823	52651017	Snrnp70|NM_009224	0	-
chr7	55754582	55754628	51	9	-	chr7	55733988	55754640	Mrgprx2|NM_001034868	0	-
chr7	66543156	66543226	6	1	-	chr7	66537248	66544536	A230073K19Rik|NR_033229	0	-
chr7	66543156	66543226	6	1	-	chr7	66537248	66544536	A230073K19Rik|NR_033229	0	-
chr7	66578599	66578636	12	2	-	chr7	66563293	66579519	C230091D08Rik|NR_015479	0	-
chr7	69119911	69119959	11	3	-	chr7	69088786	69127189	A330076H08Rik|NR_015599	0	-
chr7	71518922	71518946	9	6	-	chr7	71491643	71518981	Fan1|NM_177893	0	-
chr7	87481205	87481234	38	11	-	chr7	87470178	87485105	Unc45a|NM_133952	0	-
chr7	105215645	105215669	14	1	-	chr7	105199569	105268003	Myo7a|NM_008663	0	-
chr7	105364965	105364998	11	3	-	chr7	105362169	105458037	Acer3|NM_025408	0	-
chr7	110936815	110936886	13	5	-	chr7	110935725	110940344	Olfr67|NM_013619	0	-
chr7	111506258	111506293	19	3	-	chr7	111503911	111507160	Trim30b|NM_175648	0	-
chr7	112885852	112885875	71	10	-	chr7	112880243	112885899	Rrp8|NM_133951	0	-
chr7	113970224	113970246	5	1	-	chr7	113967002	113970257	Olfr702|NM_146597	0	-
chr7	123481866	123481893	28	2	-	chr7	123480789	123586972	Pik3c2a|NM_011083	0	-
chr7	148280702	148280731	12	5	-	chr7	148277073	148286445	Sigirr|NM_023059	0	-
chr7	149512597	149512638	14	3	-	chr7	149512014	149558164	6330512M04Rik|NM_177265	0	-
chr7	150854345	150854380	5	1	-	chr7	150851711	150871777	Tnfrsf23|NM_024290	0	-
chr7	150856750	150856791	15	1	-	chr7	150851711	150871777	Tnfrsf23|NM_024290	0	-
chr8	28196407	28196458	5	2	+	chr8	28196312	28233908	Gpr124|NM_054044	0	+
chr8	73920854	73920875	6	1	+	chr8	73920753	73928671	5430437P03Rik|NM_026636	0	+
chr8	73988823	73988871	8	1	+	chr8	73988824	73989652	Mrpl34|NM_053162	0	+
chr8	95425357	95425423	38	21	+	chr8	95425293	95426308	Capns2|NM_027112	0	+
chr8	95425357	95425423	38	21	+	chr8	95379248	95443178	Lpcat2|NM_173014	0	+
chr8	107793826	107793847	6	1	+	chr8	107793773	107799745	Hsf4|NM_011939	0	+
chr8	108379129	108379152	20	3	+	chr8	108379002	108380850	Thap11|NM_021513	0	+
chr8	113480668	113480707	32	3	+	chr8	113443764	113496397	St3gal2|NM_009179	0	+
chr8	121970749	121970773	8	2	+	chr8	121970618	121996535	Necab2|NM_054095	0	+
chr8	125590393	125590426	19	3	+	chr8	125589407	125621651	Spg7|NM_153176	0	+
chr8	125641322	125641369	5	1	+	chr8	125641273	125659085	Cpne7|NM_170684	0	+
chr8	12707914	12707973	12	1	-	chr8	12706943	12719127	Gm15348|NR_033546	0	-
chr8	12709691	12709728	17	1	-	chr8	12706943	12719127	Gm15348|NR_033546	0	-
chr8	15961516	15961538	7	1	-	chr8	15892544	17535385	Csmd1|NM_053171	0	-
chr8	19866746	19866772	11	1	-	chr8	19863863	19893010	6820431F20Rik|NR_030708	0	-
chr8	24301691	24301716	10	1	-	chr8	24283417	24318925	Agpat6|NM_018743	0	-
chr8	38015183	38015206	31	19	-	chr8	37998637	38015490	A730069N07Rik|NM_178735	0	-
chr8	41636657	41636708	10	1	-	chr8	41635512	41720146	Mtmr7|NM_001040699	0	-
chr8	47060115	47060146	10	1	-	chr8	47038959	47060606	1700029J07Rik|NM_001033148	0	-
chr8	48754606	48754629	10	3	-	chr8	48752531	48760513	Ing2|NM_023503	0	-
chr8	60255471	60255497	6	1	-	chr8	60252848	61390424	Galntl6|NM_175032	0	-
chr8	75622728	75622780	247	48	-	chr8	75338497	75876455	Large|NM_010687	0	-
chr8	106816598	106816633	18	2	-	chr8	106804941	106817081	Cmtm2a|NM_027022	0	-
chr8	107817314	107817342	83	9	-	chr8	107813823	107819998	Exoc3l|NM_177788	0	-
chr8	108462223	108462265	18	2	-	chr8	108459627	108462292	Psmb10|NM_013640	0	-
chr8	122128219	122128253	9	2	-	chr8	122121873	122129140	Taf1c|NM_021441	0	-
chr9	20807204	20807228	5	1	+	chr9	20807180	20813281	Mrpl4|NM_023167	0	+
chr9	100686950	100686978	47	3	+	chr9	100544041	100858963	Stag1|NM_009282	0	+
chr9	108894102	108894130	760	45	+	chr9	108893946	108934739	Pfkfb4|NM_173019	0	+
chr9	121628612	121628674	40	13	+	chr9	121628298	121665959	Nktr|NM_010918	0	+
chr9	7170993	7171016	5	1	-	chr9	6928502	7177046	Dync2h1|NM_029851	0	-
chr9	20264076	20264104	16	1	-	chr9	20232761	20264604	Zfp26|NM_011753	0	-
chr9	44918559	44918584	32	2	-	chr9	44915258	44943689	Gm10684|NR_033547	0	-
chr9	53759790	53759866	7	1	-	chr9	53759266	53823108	Elmod1|NM_177769	0	-
chr9	76012551	76012587	165	21	-	chr9	76011908	76061464	Gfral|NM_205844	0	-
chr9	85614794	85614830	34	3	-	chr9	85580966	85642941	Ibtk|NM_001081282	0	-
chr9	108363829	108363876	6	1	-	chr9	108349969	108363912	Klhdc8b|NM_030075	0	-
chr9	113406967	113406996	23	12	-	chr9	113405863	113496270	AU023762|NR_040760	0	-
chr9	114842830	114842892	5	1	-	chr9	114808456	114843105	Gpd1l|NM_175380	0	-
chr9	123760690	123760716	15	1	-	chr9	123698627	123760782	Fyco1|NM_148925	0	-
chr9	123760690	123760716	15	1	-	chr9	123698627	123761020	Fyco1|NM_001110253	0	-
chrX	36126026	36126050	5	1	+	chrX	36125956	36315865	6030498E09Rik|NM_183126	0	+
chrX	70962540	70962601	22	4	+	chrX	70961935	70983626	Abcd1|NM_007435	0	+
chrX	109714360	109714405	18	9	+	chrX	109714134	109748671	Zfp711|NM_177747	0	+
chrX	112021307	112021349	8	1	+	chrX	112021190	112022119	4930524E20Rik|NM_001081661	0	+
chrX	34158698	34158741	9	6	-	chrX	34148177	34185409	Akap17b|NM_001081956	0	-
chrX	54636558	54636582	16	1	-	chrX	54636524	54646213	Rbmx|NR_029425	0	-
chrX	67182767	67182797	23	2	-	chrX	67182434	67396763	1700111N16Rik|NR_033213	0	-
chrX	71269241	71269271	45	3	-	chrX	71259252	71269260	Irak1|NM_001177976	0	-
chrX	71269241	71269271	45	3	-	chrX	71259252	71269257	Irak1|NM_001177975	0	-
chrX	71269241	71269271	45	3	-	chrX	71259252	71269260	Irak1|NM_001177974	0	-
chrX	71269241	71269271	45	3	-	chrX	71259252	71269260	Irak1|NM_001177973	0	-
chrX	71269241	71269271	45	3	-	chrX	71259256	71269260	Irak1|NM_008363	0	-
chrX	71269241	71269271	45	3	-	chrX	71269187	71269275	Mir718|NR_030758	0	-
chrX	96627460	96627507	7	3	-	chrX	96600669	96639136	Gm14812|NR_033544	0	-
chrX	100660899	100660925	26	2	-	chrX	100655711	100678572	Xist|NR_001570	0	-
chrX	100660899	100660925	26	2	-	chrX	100655711	100678572	Xist|NR_001463	0	-
chrX	154036460	154036520	15	1	-	chrX	153985753	154036647	Mbtps2|NM_172307	0	-
chrX	154480953	154480978	21	11	-	chrX	154259504	154481042	Cnksr2|NM_177751	0	-
