11072019
Hi Martin,

Giorgos and Margarita were using the following thresholds to account for the diferentially expressed genes and the differentially translated: p-value below 0.05, logfc between -0,55 and 0,55 AND RPKM>or = to 1. Also, for the polysomeSeq data, they discarded genes that did not have RPKM>=1 in RNAseq. I am not sure why they did that, or whether they have discussed it with you. So, the numbers in table 2 come from the files that I sent you if you set all the above thresholds.

Please, let me know if something is not clear, or we should change it.

Thank you,

Yiota

~/bak/doc/fleming/kafasla/DKlab/mr/rnaseq-vs-polysomeseq/README-rnaseq-vs-polysomeseq.txt