ln -s ../Polysome_seq/ugc_623_27_F3-1-1.bam KO_IFN_replicate_I.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L02_ugc_623_10_F3-1-1.bam WT_0h_replicate_II_.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L02_ugc_623_11_F3-2-1.bam WT_2h_replicate_I.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L02_ugc_623_12_F3-3-1.bam WT_2h_replicate_II.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L02_ugc_623_13_F3-1-1.bam WT_6h_replicate_I.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L02_ugc_623_14_F3-2-1.bam WT_6h_replicate_II.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L02_ugc_623_15_F3-3-1.bam WT_IL4_replicate_I.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L02_ugc_623_16_F3-1-1.bam WT_IL4_replicate_II.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L02_ugc_623_17_F3-1-1.bam WT_IFN-gamma_replicate_I.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L02_ugc_623_18_F3-4-1.bam WT_IFN-gamma_replicate_II.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L02_ugc_623_9_F3.Q-2-1.bam WT_0h_replicate_I.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L03_ugc_623_19_F3-3-1.bam ΚΟ_0h_replicate_I.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L03_ugc_623_20_F3-4-1.bam KO_0h_replicate_II.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L03_ugc_623_21_F3-5-1.bam KO_2h_replicate_I.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L03_ugc_623_22_F3-6-1.bam KO_2h_replicate_II.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L03_ugc_623_23_F3-7-1.bam KO_6h_replicate_I.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L03_ugc_623_24_F3-8-1.bam KO_6h_replicate_II.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L03_ugc_623_25_F3-1-1.bam KO_IL4_replicate_I.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L03_ugc_623_26_F3-1-1.bam KO_IL4_replicate_II.bam
ln -s ../Polysome_seq/ugc_623_BC_FRAG_W_Paulina_150506_L03_ugc_623_28_F3-9-1.bam KO_IFN-gamma_replicate_II.bam

03112017
Dear Martin,

the first 8 samples correspond to TTP PAR-CLIP and control PAR-CLIP libraries. They are:
1. BMX-6h    
2-CL6-6h    
3-BMX-IL4    
4-CL6-IL4    
5-BMX-IFN   
6-CL6-IFN   
7-IgG Rb    
8-IgG Goat    

Dimitris will need them for later, but you do not need them for polysome analysis.

Best,

Yiota