long_spanning_reads v1.4.0 (2912M)
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Opening WT_6h_replicate_IIb/tmp/left_kept_reads.m2g_um_seg1.bwtout.z for reading
Opening WT_6h_replicate_IIb/tmp/left_kept_reads.m2g_um_seg2.bwtout.z for reading
Opening WT_6h_replicate_IIb/tmp/left_kept_reads.m2g_um_seg3.bwtout.z for reading
Opening WT_6h_replicate_IIb/tmp/left_kept_reads.m2g_um_seg1.to_spliced.bwtout.z for reading
Opening WT_6h_replicate_IIb/tmp/left_kept_reads.m2g_um_seg2.to_spliced.bwtout.z for reading
Opening WT_6h_replicate_IIb/tmp/left_kept_reads.m2g_um_seg3.to_spliced.bwtout.z for reading
Loading reference sequences...
        reference sequences loaded.
Loading spliced hits...done
Loading junctions...done
Loading deletions...done